Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2138 ATGGACGCCGCCCAGATCCATGACCCTGGCAAGACGCACGTCTGGCTCGGAACTTTCGAAACTGCAGAGGGGGCAGCGCGTGCGTACGGCGCCAAGGCTAAGACCAATTTTCTGATGGCGGCGGAGCTTCTGAACAACAGCAACAACTTCGTTCACATTAACAATAACACATGTAGCCCGAGTCAGAGTAATACGCTTGATTCATCTTCGCGGCTTCCGCCACCGCCACCGTCAGTGCAGTCCTAG 246 0.5569 MDAAQIHDPGKTHVWLGTFETAEGAARAYGAKAKTNFLMAAELLNNSNNFVHINNNTCSPSQSNTLDSSSRLPPPPPSVQS* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2138 81 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 70 - -
Amo13g2138 81 SUPERFAMILY DNA-binding domain 4 35 IPR016177 GO:0003677
Amo13g2138 81 ProSiteProfiles AP2/ERF domain profile. 1 47 IPR001471 GO:0003700|GO:0006355
Amo13g2138 81 MobiDBLite consensus disorder prediction 55 69 - -
Amo13g2138 81 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 3 70 - -
Amo13g2138 81 Gene3D AP2/ERF domain 3 45 IPR036955 GO:0003700|GO:0006355
Amo13g2138 81 MobiDBLite consensus disorder prediction 55 81 - -
Amo13g2138 81 SMART rav1_2 3 47 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2138 Amo-Chr13 34759408 34760294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2138 3 70 AP2-EREBP Transcription Factor Family AT3G15210 53.165 2.13e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2138 K09286 - cit:102614391 64.3142