Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2118 ATGCGTCCACCGTTGAAGAGAGTCGATTTCCGTCCAGGCGACAAAGTGGAGGTTTGCAGTAAAGAAGAAGGCTTCCTGGGCTCATACTACGAGGCAACCATTCTTTCCCGCCTCGAAACCGGCCGTTACGTCGTCCGTTACAAGACACTCCTCCGTGACGACGCCGTTTCTGAGCCGTTAACCGAAACGCTCTTCCCGAGGGACATCCGGCCTTCCCCTCCGAAGGTATATTCCCGCGGCGAGTTCTCTCTCTACCAGGCAGTTGATGCCTTCGACAACGACGGTTGGTGGTCCGGCGAGATCACCGGCAGGCTTGGGCCTCACCATTACTATGTTTATTTCCGTACAACCAATGAAGAGATCGCTTATCCTTCTAATAAGATTAGGGTTCATCATGAGTGGGTTAACGGCGACTGGATTCTCTCCCAAAGAGAGCAACCACAGCCACAGCCACTGCAGAATCAGCAACAACAGCTAGGTCAACAATTCAATTGA 495 0.5253 MRPPLKRVDFRPGDKVEVCSKEEGFLGSYYEATILSRLETGRYVVRYKTLLRDDAVSEPLTETLFPRDIRPSPPKVYSRGEFSLYQAVDAFDNDGWWSGEITGRLGPHHYYVYFRTTNEEIAYPSNKIRVHHEWVNGDWILSQREQPQPQPLQNQQQQLGQQFN* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2118 164 Pfam Agenet domain 13 74 IPR008395 -
Amo13g2118 164 PANTHER - 8 146 - -
Amo13g2118 164 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 146 - -
Amo13g2118 164 Gene3D - 2 82 - -
Amo13g2118 164 SMART agenet_At_2 80 136 IPR014002 -
Amo13g2118 164 SMART agenet_At_2 8 77 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2118 Amo-Chr13 33999159 34000225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2118 20 134 PHD Transcription Factor Family AT5G58610 29.630 3.91e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2118 - - adu:107478045 300.056