Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2104 ATGCACGAGGACCACATAATGTCGACGGACCAAGCAATTTATGAAGAAGCATCGTACAGCACTGCATATGATGATAGTGATCAGTATAATTCTTGCGACGTTAATGTTCCATCGATTAGTGAAGATGACACACAACATGTCGACAAGGGGAAAGAATCTGTAAACATTATTCAAGTAGAGGACGATGCAATGGCAGTGAATAATGAGTTACCCGATCACACTAGAATTCCAATAGATGAAATTTCGTACGTAGGATTGAGATTTGTTTCCTTGCAGCGGGCACAAGAGTTTTATTCTAATTATGCAAAGAAAGTTGGCTTCGTGACTAGGATTAGGAATACCAACTTTGACAAGACCAGGACGGATTCAAAGATACCCATTAACCAATTGTTACACTGTAGTCGTGAAGGTTATCGGGAGTCTCGAGTGAAGGCAGCAACTCGGGTAAAGAGAATAACAACAGCTGAATGCAAAGCAAGGATGTACGTGATGCTTGATAGGCAGCAGGATAATTGGATGGTCTCCACATTAGAACTGAAGCACACCCACCTGTACCTTTATGACGAACGTCAAATGTGGGTTCCAATCTATTTTCAAGGTGAATTTTGGGTAGGTATGATAAGTACTCAACGAAGTGAGAGTATGCATGCCTTTTTCGGTGGTTACTTGCATTGCAAGAGTGGACTGGTTCAGTTCGTGCATGAGTATGACAACGTGCTTGGGAACAAGGAGCAGAAGGATCTGGAAGATGATGCTGCAGACTCTAAAGGAGTTGTCCCCTGTTCATCAAGTTCTACAATTGAAAGACAATTTCAGCGCTGCATTTCTTAA 831 0.42 MHEDHIMSTDQAIYEEASYSTAYDDSDQYNSCDVNVPSISEDDTQHVDKGKESVNIIQVEDDAMAVNNELPDHTRIPIDEISYVGLRFVSLQRAQEFYSNYAKKVGFVTRIRNTNFDKTRTDSKIPINQLLHCSREGYRESRVKAATRVKRITTAECKARMYVMLDRQQDNWMVSTLELKHTHLYLYDERQMWVPIYFQGEFWVGMISTQRSESMHAFFGGYLHCKSGLVQFVHEYDNVLGNKEQKDLEDDAADSKGVVPCSSSSTIERQFQRCIS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2104 276 Pfam FAR1 DNA-binding domain 96 183 IPR004330 -
Amo13g2104 276 PANTHER OS06G0517100 PROTEIN 186 274 - -
Amo13g2104 276 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 186 274 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2104 Amo-Chr13 33511538 33514053 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g2104 FAR1 3.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2104 - - aip:107606659 324.709