LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo13g2071	ACAGTCAACTTGAAAGATGTGTTGTACACACGGAGTGACGACGGTGTTGATTACGGAGATGTTGCTTCTCTGACCAATGACGACATATTAAGAAAGATATTTCCAACGAAAGAATATGCATATGATTTTTATCAAAAGTTGGGTAGATTTCATGGTTTTAGAAGTCGGAAGGGGGATATACATAGGAAACATTACAATCGAGTGGATAGGAGGAGGCCTCAGAAGCTGGAGACAAGGACAAACTGTGAGGCGAGGATGTGCATATACCTTGACCGGAGCAATAACATCTGGAGGGTGAAGAAGGTTATCACGAAGCACAACCATGCGCTGACAAATCATGGCACGGTCCACCTAATTTCATATTTTTGGTCCACGACAGAAGCAGCAAAAGCCCAAATAAATGGGATGCAAGGGTGTGAAATTTTAACGTCGAAGACGATACAGTACCTGGCTGGCATGGCCGGAGGGTTTTCTCTAGTTGGTTTCCTGAAGAAGAATGCTTATAACTACGTTGACAGTAAGAGGCATGCTAGAATAGTCGACGGGGATGCGAACTCGGCTATAGTGTACATGGAGGAAAAAGTTGATGCCGATCCAATGTCTATGGCTCGCTATAATTTTACTGTGGATGACATGCTTGCTAATTTATTCTGGGCAGACGGTGCAAGTAGGCTTGACTATTAG	684	0.4371	TVNLKDVLYTRSDDGVDYGDVASLTNDDILRKIFPTKEYAYDFYQKLGRFHGFRSRKGDIHRKHYNRVDRRRPQKLETRTNCEARMCIYLDRSNNIWRVKKVITKHNHALTNHGTVHLISYFWSTTEAAKAQINGMQGCEILTSKTIQYLAGMAGGFSLVGFLKKNAYNYVDSKRHARIVDGDANSAIVYMEEKVDADPMSMARYNFTVDDMLANLFWADGASRLDY*	228

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo13g2071	227	Pfam	FAR1 DNA-binding domain	62	111	IPR004330	-
	Amo13g2071	227	PANTHER	OS02G0262500 PROTEIN	69	227	-	-
	Amo13g2071	227	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	69	227	IPR031052	GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo13g2071	Amo-Chr13	32656344	32657091	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Amo13g2071		FAR1	1.6e-06	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo13g2071	-		-	adu:107493380	298.901