Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2048 ATGGCTAAGGAGAAGAGAGAGAGCTTGTTAGGAATGGGAAGAAAGAGGACACGTGACGCTGGCAGCCGTCGTGATCGCCCCAAACCGCCACAACTTGAGGTTCATGAAATGGGTTCATATCTTCAAATTGTAATGACATGTGGATTAGATTCCCAGTTCATATTCTCTGAAATCATTCGTATTCTGAATGAAGAGAACATTGATGTCAAGAGTGTCAAATCCTCACTCGTCGAAAATTCCATGCACCATGTTATTTATGCAGAGATTTCACAATCTTTGCTTCAATTGGGTGCAACTAAAGTAAGTGAGAGATTGAAAAGGTTTGTGAATGAACCAACCAGTGAAATTGAATTACAATCTGATCATCAGTTATTGGATTTTGAGATTGATACTGATGAATTAGCGGAGCTTCTAGATTTTTTAGAAGAGAAATGA 435 0.3885 MAKEKRESLLGMGRKRTRDAGSRRDRPKPPQLEVHEMGSYLQIVMTCGLDSQFIFSEIIRILNEENIDVKSVKSSLVENSMHHVIYAEISQSLLQLGATKVSERLKRFVNEPTSEIELQSDHQLLDFEIDTDELAELLDFLEEK* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2048 144 MobiDBLite consensus disorder prediction 1 31 - -
Amo13g2048 144 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 116 IPR015660 GO:0003700|GO:0006357
Amo13g2048 144 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2048 Amo-Chr13 31811070 31811953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2048 28 110 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 31.765 1.56e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2048 - - adu:107478214 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2048 13 31811070 31811953 Amo13g2048 13 31811070 31811953 ECH