Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2047 ATGTCTTCCCTTCTCATATATCTCTTCCTTCTGAGAATAACCTTAGTTTCTTCGTCAACAGAATTTGTCTACAACACCAACTTCAACTCCACCAACATAAATCTCTATGCAAACGCCACTATTGATGATCACTCTCACTCTTCAATTCTCACCCTTACCAACCATGCCTCTTTCTCTATTGGCCGTGCTTTCTACCCTTCCAAGATCCCAACAAAATCTTCCTTTTCTTCCAACCCTTTACCGTTCTCAACCTCCTTRATCTTCTCRATTGCACCATTCAAGCACCTTCTCCCTGGCCATGGTTTTGTGTTCTTGTTCTCACCTTTTGAAGGAGCAAACGGGGTTAGCTCAGCTCAGCACCTTGGCCTCTTCAACTTGACCAACAATGGTAACCCCAAAAACCATGTTTTTGGGATTGAGTTTGATGTGTTCAAGAACCAAGAATTCAATGACATCAATGATAACCATGTGGGTTTGGATGTGAATTCTCTTACTTCTTTGGCCTCACACGATGCTGGATTTTGGGTCAGTGGAAAACATGATGAAAAGTTTAAGGAATTGAAGCTTAACAATGGTGAGAACTATCAAGTGTGGATTGAGTATTCAGATTCTAGAGTTAATGTAGCAATGGCTATTGCAGGGAAAAGAAGGCCTAATAGGCCTTTGATTAGTGAACTTGTGAATCTTTCTGATGTCTTTTTGGATGAAATGTTTGTGGGATTTTGTGGAGCAACAGGGCAACTTGTTGAGAGTCACAAGATTTTGGCATGGAGCTTTAGCAACTCAAATTTTTCYATCGGCGATGCTTTGGTGACTACGAATTTGCCTTCATTTGTGCTTCCAAAAGAKCCAGTTTTGAAGTCAAGAGGTTTTGTTTCAGGTATCAGTTTTGGGATTTTTATCTTTGTTATTGGTAGTGCAGCTATGGTGTTTGTTGTTTTGCTCAAAAGAAAAAGAAGCAAAAGAATGGAGGAAGAGGGAGATATTGAAGACTGGGAATTAGAGTATTGGCCACACCGTATTAGTTATGAAGACATTTATGCTGCAACTAAAGCATTTTCAGAACAGAATATAATTGGGTTTGGAGGGAATGGAAAAGTTTATAAAGGGATTCTACAAGGAGTAGAAGTAGCAGTGAAAAGAATCCCTTATGACAGTGAATATGGTATGAGGGAGTTTTTATCTGAGATTTCAAGCTTAGGAAGATTGAAGCATAGGAATGTGGTTCCATTGAGGGGTTGGTGTAAGAAAGAGAGAGGAAGCTTGATCCTAATTTATGATTATATGGATAATGGAAGTTTGGACAAGATAATATTTGATTCTGATGAGAACTCAATTTTCCATTGGAAAAACAGAATGAAGGTGCTGAAGGATGTGGCTATGGGGATATTGTATTTGCATGAGAGTTGGGAAGTTAAGGTGTTGCATAGGGACATAAAAGCAAGCAATGTGTTACTTGACAAGGATATGAATGCAAGGTTGGGGGATTTTGGACTCGCCCGGATGCATCATCATGAGCAGATACCTAACACCTCTCGAGTGATCGGAACGGTTGGCTACATGGCACCGGAACTGCTAAGAACCGGGAGAGCCTCGACGCAAACTGATGTGTTCAGCTTCGGCGTGTTGGTTCTAGAGGTTGTGTGTGGGAGAAGGCCTATAGAAGAGAATAAGCCAGCATTGGTTGGTTGGGTGTGGAGGCTAATGGAGAGAGGAGAGTTGTGTTGTGCTCTTGATGAAAGATTGAAAATGAGGGGTGATGAAGATTATAGCATTGATGAAGTTGAGAGAGTTCTTCATCTTGGTTTGTTGTGCACACATTATGATCCTCAAGTTAGGCCAAGTATGAGGCAAGTTGTGAAGGTTTTGGAGGGTGAGAGTTTGGAAATAAGCTTAGTTGATAAAATAAATTCCGCTGCTGATGGATATAGTGGGGTTCACCCCACCATTGAAGATATATCTCAATGTTCTTTCACAACTCAATGTGAGGGCAGATGA 1998 0.4079 MSSLLIYLFLLRITLVSSSTEFVYNTNFNSTNINLYANATIDDHSHSSILTLTNHASFSIGRAFYPSKIPTKSSFSSNPLPFSTSLIFSIAPFKHLLPGHGFVFLFSPFEGANGVSSAQHLGLFNLTNNGNPKNHVFGIEFDVFKNQEFNDINDNHVGLDVNSLTSLASHDAGFWVSGKHDEKFKELKLNNGENYQVWIEYSDSRVNVAMAIAGKRRPNRPLISELVNLSDVFLDEMFVGFCGATGQLVESHKILAWSFSNSNFSIGDALVTTNLPSFVLPKXPVLKSRGFVSGISFGIFIFVIGSAAMVFVVLLKRKRSKRMEEEGDIEDWELEYWPHRISYEDIYAATKAFSEQNIIGFGGNGKVYKGILQGVEVAVKRIPYDSEYGMREFLSEISSLGRLKHRNVVPLRGWCKKERGSLILIYDYMDNGSLDKIIFDSDENSIFHWKNRMKVLKDVAMGILYLHESWEVKVLHRDIKASNVLLDKDMNARLGDFGLARMHHHEQIPNTSRVIGTVGYMAPELLRTGRASTQTDVFSFGVLVLEVVCGRRPIEENKPALVGWVWRLMERGELCCALDERLKMRGDEDYSIDEVERVLHLGLLCTHYDPQVRPSMRQVVKVLEGESLEISLVDKINSAADGYSGVHPTIEDISQCSFTTQCEGR* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2047 665 Pfam Protein kinase domain 354 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2047 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Amo13g2047 665 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 8 628 - -
Amo13g2047 665 Gene3D Transferase(Phosphotransferase) domain 1 429 638 - -
Amo13g2047 665 ProSitePatterns Protein kinases ATP-binding region signature. 359 380 IPR017441 GO:0005524
Amo13g2047 665 Gene3D Phosphorylase Kinase; domain 1 313 428 - -
Amo13g2047 665 CDD STKc_IRAK 359 625 - -
Amo13g2047 665 SMART serkin_6 353 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2047 665 ProSiteProfiles Protein kinase domain profile. 353 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2047 665 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 264 IPR013320 -
Amo13g2047 665 Gene3D - 17 263 - -
Amo13g2047 665 Coils Coil 315 335 - -
Amo13g2047 665 PANTHER - 8 628 - -
Amo13g2047 665 CDD lectin_legume_LecRK_Arcelin_ConA 20 262 IPR001220 GO:0030246
Amo13g2047 665 SUPERFAMILY Protein kinase-like (PK-like) 331 624 IPR011009 -
Amo13g2047 665 Pfam Legume lectin domain 20 263 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2047 Amo-Chr13 31737104 31739164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2047 18 577 Receptor kinase-like Gene Family AT4G04960 61.837 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo13g2047 Pkinase 8.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2047 - - adu:107478122 1154.81