Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2027 ATGCCAACAAACTCGCAGCAACAGTTTCACGCCTTCTACGAAGGATGGATCCAACGCAAACAGACTCTCCTCGACGAGCTTCTCACACTTTCCAACGCTCCCGACTCCCAACACAAACACACCGCTCTCATTGAATCCGTTATCTCCCACTACCAACAATACTTCGAGCACAAAACACGCCTCCAAAACGACGACGTTTTGCTTCTCTTCTCTCCCACCTGGCTCTCCACCTACGAGCGAGCACTTCTGGCGGAGACTAGGACCGGGGAGAGGGAGCTTTCTGCTGCAATGGCGGCGTTTCAGGAGAGCGTGGCTAGTCCGCGCGTGTTGCAACGCGCTAGGAGAGTGGGGAGGTTGTTGGATGGGGAGATTGATGAGCTTGATGAGTCTATGGGGGGGATGAGGAACGCCGTGGGAGAGCTTTTTCAGAGAGCGGATGAGTTGAGGGTGGCTACGGTTAGCAAGGTCGTGGCGGTTCTTTCTCCGCCGCAGACGGTTAGGTTTCTTGCCGCGGCCTTAGGGTTTCAGCTACGTGTCAGGCGGTGGGGGCTGGAAAGGGACCAGTCCCGTTGA 573 0.562 MPTNSQQQFHAFYEGWIQRKQTLLDELLTLSNAPDSQHKHTALIESVISHYQQYFEHKTRLQNDDVLLLFSPTWLSTYERALLAETRTGERELSAAMAAFQESVASPRVLQRARRVGRLLDGEIDELDESMGGMRNAVGELFQRADELRVATVSKVVAVLSPPQTVRFLAAALGFQLRVRRWGLERDQSR* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2027 190 PANTHER TRANSCRIPTION FACTOR HBP-1B 84 189 - -
Amo13g2027 190 PANTHER TRANSCRIPTION FACTOR HBP-1B 3 83 - -
Amo13g2027 190 PANTHER - 84 189 - -
Amo13g2027 190 Pfam Seed dormancy control 24 83 IPR025422 GO:0006351|GO:0043565
Amo13g2027 190 PANTHER - 3 83 - -
Amo13g2027 190 ProSiteProfiles DOG1 domain profile. 6 189 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2027 Amo-Chr13 31072106 31072777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2027 9 180 bZIP Transcription Factor Family AT3G12250 22.749 8.73e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2027 - - aprc:113865861 183.726