Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2020 ATGGCGAACGCGGCGATTATCGCCGAGCTTAACAGGAACACTGAAAAGCGTGCTAAATTAATTGAAGAAATTGTGAAGTTGGAGAGAAAGATCTTTCCCAAACACGAATCATACGCCGCATTTTTCGACAACGAACTCAAAAGGAAGAACGCTGGACTTCTCTACCTCCACGCTGATGGTGAACTTGTTGGCTATGTCATGTATTCTTGGCCTTCTTCCCTCTACGCCTCCATCACCAAGCTCGCAGTGAAGGAGCAATGGAGGAAGCAAGGCCACGGCGAGGCACTGCTGAAAGCAGCGATTCAGAAATGCAAGACCAGGAAGGTTTCGCGCATAATGTTTCATGTGGATCCCTCGAGGACACCAGCAGTGAGCCTTTACAAGAAACATGGTTTTCAAGTTGATCGCTTGATTGAAGGTTACTACTCCTTGGAAAGACATGCATATGTCATGTACTTGGAACTTGATTCAAATTGA 477 0.4612 MANAAIIAELNRNTEKRAKLIEEIVKLERKIFPKHESYAAFFDNELKRKNAGLLYLHADGELVGYVMYSWPSSLYASITKLAVKEQWRKQGHGEALLKAAIQKCKTRKVSRIMFHVDPSRTPAVSLYKKHGFQVDRLIEGYYSLERHAYVMYLELDSN* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2020 158 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 157 - -
Amo13g2020 158 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 21 154 IPR016181 -
Amo13g2020 158 CDD NAT_SF 59 115 - -
Amo13g2020 158 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 156 IPR000182 GO:0016407
Amo13g2020 158 Coils Coil 10 30 - -
Amo13g2020 158 Pfam Acetyltransferase (GNAT) family 23 132 IPR000182 GO:0016407
Amo13g2020 158 Gene3D - 15 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2020 Amo-Chr13 30895102 30899123 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo13g2020 Acetyltransf_1 4.5e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2020 - - adu:107477875 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2020 13 30895102 30899123 Amo13g2020 13 30895102 30899123 ECH