Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1972 ATGTGCTTCGGCACATTAGAAGATGCGCGTGCATATTATTACCGATATGCGGCTTTGCATTGTAATGGAGATGGATACCGCACATCCCGTGTAAAGGCACCCAAGAGAAGGAAAACGGTGGCCTCAACAAACTGCAAAGCCCGTTACTATTTGGCATTAGATAAGATGACAGGGCAGTGGAGGATTTCTCGAGTAGAGGTATCCCACTCACACCCGCTTAATCCGAAGCTATCTGGAATGTTCTCAACAAACCGTCAGCTAAGTATGCATTTGAAGGACCTGATACAGCAAAACGACTAA 300 0.46 MCFGTLEDARAYYYRYAALHCNGDGYRTSRVKAPKRRKTVASTNCKARYYLALDKMTGQWRISRVEVSHSHPLNPKLSGMFSTNRQLSMHLKDLIQQND* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1972 99 Pfam FAR1 DNA-binding domain 15 75 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1972 Amo-Chr13 29851875 29852251 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g1972 FAR1 6.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1972 - K01807 adu:107493576 171.785