Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1905 ATGGAGTTGACAAGACCTGGCTATGCCGTAATTTATGTCATTCTACTTTGCGCATTGGCACAAGGGGGCTCAGAGGGGAAGAGGGGCGAGGACGATGATTTTTCTCCATCATCGTTACTTGTACACACAACACAACAGGCCGAGATAGTGCCAAAACATAGAAAAGAATTGACAAAGAACATTGAAGGCAAAGAGTTGGACTTACATGCAAAAGAAGAGAGCAATGACATTAGGCCAATACTTTTCAGACAAAACAACACAAACAAAGCAACAAAATCAAACCAAACTATTGATCCACCAACACCACAACCACAGTCATCGCCACCGCGACGATCTCATCGGCTCCTTGCCGCTTCTAGATCTCTAACAGAGAGTAGTGATCCTGTAACTTCTCCTCCACCTAATAAAAATGAAGATGACAGACAACCAAAAACGACGGTTCATGGTGCTGCTGCTGTATCAGGAATTCTAATGGCACTTGGGGTGTCCTTTTGCTATAGACAGGTCAAAACCAACAAAGAGGAAAAAGAAGATATACTAATATTAACCTCAAAGGATTATGCTGGCGGTTCACCAAAGATTGTTCGTTTGGGAGATAATACTGAACTTAACAAGCATAATAAGGAAGAAGAATCTGTTACAGATAACAATGAAAAGAAAACTTCTGATGATGATGCTAAGAATGAAGGTAGCAACACTACCTCAGAAGTTGAGACAACAGCACCATTACAAGTTGTGGAACATGTAGTTGAATTTGCACCAGGCCCACCACAACCACCACCACCGCCACCAACTCGATCAGCTCCACTACCTCCCCCGGCCCCACGGGCCCCTCCACCGCCGGTCCCCCCACGGGGCCACGGTCCGCCACCACCACCGCCTCCAAGGCTACCCGGTCAGGGCCCTCGGGCGCCACCGCCGCCGCCTTTAAGAGGAGGACGAGGAACAAGTCATCCTCCACCTGTTCCTTCAAGACCGTTGTCTAAAAGATTTAGAAATGTTGCTAGAGTAGATAGCTTTACTGAGGTCCCTGATCCTGCAAAGCCTAAACTAAAGCCATTTTTCTGGGACAAGGTTAATGCAAAATCTGATCAAGCAATGGTGTGGCACAAAATCAGCGGAGGTTCATTCGTATTCAATGAGGAACAGATGGAGTTTCTATTTGGTTGCGCAAACCATAACAAAAATGAACGCAAAAAGGATTCACCACAAATTGATACAGCACAACTTGTTCAGATTATTGACAAGAAAAAAGCACAGAATTTGTCAATTCTTTTGAAAGCTTTGAATGTGACAACAGAGGAAGTTGTTGATGCCATTAAAGAAGGTAATGAGCTTCCTATTGAGCTCATGCAGACACTGGTGAAGATGGCTCCGACATCCGACGAAGAATTGAAGCTTAGGTTATATACAGGACCCCTTTCTGATCTTGGCCCTGCAGAGAAGTTTCTCAAAGTCTTGGTAGATATTCCATTTGCTTTCAGACGCATTGAATGTTTGATTTTCATGTGTACCCTTCAAGAAGAGTCCTCAACTATGAGGGAGTATTTCACAACATTAGAGGTTGCTTGCAAGAAACTTGTAAAAAGTAGGCTATTCTTGAAGCTTCTAGAAGCAGTTCTTAAAACCGGCAACCGAATGAACGACGGAACATACCGCGGCGGCGCGCAAGCATTCAAGCTGGACACACTCTTGAAGCTATCAGACGTGAAAGGAACAGATGGGAAGACGACGCTGCTGCACTTCGTTGTTCAAGAAATCATTCGATCCGAGGGAGTTAGAGCTCTAAGAACGGCGAAAGAAAGCGGAAGCATGCCAAACTTGGAAACAGAGGATTCTTCTGAAGAAAACTACCGAAGCCTCGGCATTGAAGTAGTTTCAGGCCTAAGCACTGAGCTATTGGACGTGAGAATGGCGGCGTTAATAGACGGCGATTTGATCAGTTCTACGGTGGCGAAACTCAGCCACTCGCTTTCCAAGACTCGAGAGTTTCTTGACACCGAGATGAAGAACGTTCAAGAAGACGGCGAGTTCCGATCTTGCATGGAGAGGTTTCTGGAGAAGGCGACATCGGAAGTGGCTTGGTTGATTGAGGAGGAGAAGAGGATAACGGAACTTGTTAAGGGAACTGCAGATTATTTTCACGGTAATTCAGGGAAAGAAGAAGGGCTTAGATTGTTCGCCGTTGTCCGCGATTTCTTGTTCATATTGGATAAGGTGTGCAAGGAGGTGAAGGAAACAAACGTTAAAGAGGCAAAGATTAATGCTGCTTCAAAGATTAATAATAATAACAATAATAATCATCATCATAATGATAATAACAATAATAATAGTAATGTTAAAGAGTCTTCACCATCAGTGACGCCATCTTCTACCACGGAAGCTCAACAGCAAAATTCAGGGCCTTCTGAACTTCATAGGAGATTGTTTCCTGCTATTGTCCAGAGGAGAGTGGATGATGATTCTAGCTCTGATGATGACTACGACGATGACGACGATAATAACAAAATTTCTCCATAA 2520 0.4425 MELTRPGYAVIYVILLCALAQGGSEGKRGEDDDFSPSSLLVHTTQQAEIVPKHRKELTKNIEGKELDLHAKEESNDIRPILFRQNNTNKATKSNQTIDPPTPQPQSSPPRRSHRLLAASRSLTESSDPVTSPPPNKNEDDRQPKTTVHGAAAVSGILMALGVSFCYRQVKTNKEEKEDILILTSKDYAGGSPKIVRLGDNTELNKHNKEEESVTDNNEKKTSDDDAKNEGSNTTSEVETTAPLQVVEHVVEFAPGPPQPPPPPPTRSAPLPPPAPRAPPPPVPPRGHGPPPPPPPRLPGQGPRAPPPPPLRGGRGTSHPPPVPSRPLSKRFRNVARVDSFTEVPDPAKPKLKPFFWDKVNAKSDQAMVWHKISGGSFVFNEEQMEFLFGCANHNKNERKKDSPQIDTAQLVQIIDKKKAQNLSILLKALNVTTEEVVDAIKEGNELPIELMQTLVKMAPTSDEELKLRLYTGPLSDLGPAEKFLKVLVDIPFAFRRIECLIFMCTLQEESSTMREYFTTLEVACKKLVKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGVRALRTAKESGSMPNLETEDSSEENYRSLGIEVVSGLSTELLDVRMAALIDGDLISSTVAKLSHSLSKTREFLDTEMKNVQEDGEFRSCMERFLEKATSEVAWLIEEEKRITELVKGTADYFHGNSGKEEGLRLFAVVRDFLFILDKVCKEVKETNVKEAKINAASKINNNNNNNHHHNDNNNNNSNVKESSPSVTPSSTTEAQQQNSGPSELHRRLFPAIVQRRVDDDSSSDDDYDDDDDNNKISP* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1905 839 MobiDBLite consensus disorder prediction 108 136 - -
Amo13g1905 839 MobiDBLite consensus disorder prediction 199 231 - -
Amo13g1905 839 MobiDBLite consensus disorder prediction 759 804 - -
Amo13g1905 839 Pfam Formin Homology 2 Domain 344 735 IPR015425 -
Amo13g1905 839 MobiDBLite consensus disorder prediction 69 147 - -
Amo13g1905 839 MobiDBLite consensus disorder prediction 79 100 - -
Amo13g1905 839 MobiDBLite consensus disorder prediction 759 839 - -
Amo13g1905 839 MobiDBLite consensus disorder prediction 189 330 - -
Amo13g1905 839 SUPERFAMILY Formin homology 2 domain (FH2 domain) 409 764 - -
Amo13g1905 839 SMART it6_source 341 752 IPR015425 -
Amo13g1905 839 PANTHER FORMIN-LIKE PROTEIN 1 82 - -
Amo13g1905 839 PANTHER FORMIN-LIKE PROTEIN 98 829 - -
Amo13g1905 839 Coils Coil 54 74 - -
Amo13g1905 839 ProSiteProfiles Formin homology-2 (FH2) domain profile. 341 763 IPR015425 -
Amo13g1905 839 Gene3D Formin, FH2 domain 347 778 IPR042201 -
Amo13g1905 839 MobiDBLite consensus disorder prediction 253 326 - -
Amo13g1905 839 PANTHER FORMIN-RELATED 98 829 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Amo13g1905 839 PANTHER FORMIN-RELATED 1 82 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1905 Amo-Chr13 28633855 28638780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1905 345 819 FH2 protein (formin) Gene Family AT5G54650 56.907 9.18e-177 531