Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1899 AATGACCATGGATATTTGAAGAAAAAGGTAGGAATTGCAATTGGTGCGACTATTTTGGGATTAATCACATCTGTTAGCATAGTGATAATAAAAAAATCAGGAGTTGCAAGAATAATTCAAAGAAACAGACAAGGACAGAATGTCACTGAGCTACCAATATTTGATTTCTCAGTCTTAGTTAAGGCAACAGAGAACTTTTCAAGTCGTAACAAACTTGGAGAAGGTGGTTTTGGATCAGGCACACTAACAAATAGCCAAGAGTTAGCTGTGAAAAGGCTTTCAAAAAAGTCTAAACAAGGTTTAGAAGAGTTTAAAAATGAAGTGGCGTTGATAGCCAAACTTCAACATCGTAATCTTGTAAAGCTTTTTTGTTTTTGCATTCAAGGAGTAGAAAAAATATTGATTTATGAATACGTGCCGAATAAAAGCCTAGACTACTTTGATTTTGGTGAAGCCAGAAAGAAGATGCTAGATTGGCTTAAGCGTTTCAACATTATCATTGGTATTGCTCGGGGACTTCTTTATCTTCATCAGGATTCTAGACGGAGGATTATTCATAAAGACTTGAAAACTAGCAACATTCTGTTAGATGCAAATTTGAATCCTAAAATATCAGACTTTGGCCTAGCTCGGACATTCTTAGGCAATCAGCTCGAGGCTAACACGAACAGGGTAGCTGGAACATATTATATGCCTCCCGAATATGCAGTACATGGACAATATTCAATGAAGTCTGATGTTTTTAGCTACGGTGTCATACTACTAGAGTTGATAAGTGGGAAGAATAATAGAAAAATTGACGAAAGGACACAGAAAACCTTTAATGCGTATACAAAAGACAAAGAATTCAACACATAA 858 0.3578 NDHGYLKKKVGIAIGATILGLITSVSIVIIKKSGVARIIQRNRQGQNVTELPIFDFSVLVKATENFSSRNKLGEGGFGSGTLTNSQELAVKRLSKKSKQGLEEFKNEVALIAKLQHRNLVKLFCFCIQGVEKILIYEYVPNKSLDYFDFGEARKKMLDWLKRFNIIIGIARGLLYLHQDSRRRIIHKDLKTSNILLDANLNPKISDFGLARTFLGNQLEANTNRVAGTYYMPPEYAVHGQYSMKSDVFSYGVILLELISGKNNRKIDERTQKTFNAYTKDKEFNT* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1899 285 Gene3D Phosphorylase Kinase; domain 1 39 138 - -
Amo13g1899 285 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 6 268 - -
Amo13g1899 285 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 268 - -
Amo13g1899 285 ProSiteProfiles Protein kinase domain profile. 66 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1899 285 SMART serkin_6 66 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1899 285 Pfam Protein kinase domain 68 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1899 285 SUPERFAMILY Protein kinase-like (PK-like) 46 267 IPR011009 -
Amo13g1899 285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Amo13g1899 285 Gene3D Transferase(Phosphotransferase) domain 1 140 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1899 Amo-Chr13 28455732 28457131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1899 10 266 Receptor kinase-like Gene Family AT4G23190 52.809 1.77e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo13g1899 Pkinase 5.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1899 - - aip:107614884 382.874