Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1894 ATGAAGGTACTTGCTGTGAAGAAACTTGAAAAGAGAGTTTGTGATCACCAGGAGGAGGAGGATTTTCTTGAATTATTTATTGGGTACTGTTCAGAGCATGGTCAAAGGCTTCTGATATATGAGTATTGCAGTAATGGATCACTCAATGAGGCACTCCACTCAGAGGATGAATTTAAAACAAGACTCACATGGAATGCTTGCATCCGGATAGCACTTGGGGCGGCTAGGGCCCTAGAGTATTTGCATGAGCAAGAGCAATGTCAGCCGGCTGTGATTCACAGAAATTTCAAGTCTGCTAACATTCTTCTTGACAATGACCTATAA 324 0.4228 MKVLAVKKLEKRVCDHQEEEDFLELFIGYCSEHGQRLLIYEYCSNGSLNEALHSEDEFKTRLTWNACIRIALGAARALEYLHEQEQCQPAVIHRNFKSANILLDNDL* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1894 107 PANTHER OS01G0253100 PROTEIN 3 107 IPR045271 GO:0004714|GO:0006468
Amo13g1894 107 Pfam Protein tyrosine and serine/threonine kinase 25 105 IPR001245 GO:0004672|GO:0006468
Amo13g1894 107 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 3 107 - -
Amo13g1894 107 Gene3D Transferase(Phosphotransferase) domain 1 1 107 - -
Amo13g1894 107 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1894 107 SUPERFAMILY Protein kinase-like (PK-like) 3 106 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1894 Amo-Chr13 28339228 28340989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1894 2 107 Strubbelig Receptor Gene Family AT4G03390 56.667 1.80e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Amo13g1894 PK_Tyr_Ser-Thr 1.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1894 - - ahf:112737625 185.267