Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1874 ATGTCTGAATTCGACACTAACATCTCAACTGCTTTTGATCCCTTTGCTGAGGCAAATGCTGACGACTCAGGTGCTGGGGCAAAAGAGTATGTTCATGTGCGTATACAACAACGRAACGGAAGGAAAAGCCTGACAACTGTTCAAGGATTAAAGAAAGAATTCAGCTATACTAAGATACTCAAAGACCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTACAGGACCCTGAGTTAGGCCAGGTCATACAGCTTCAGGGAGATCAAAGAAAGAACGTTTCAACTTTCCTTGTCCAAGCGGGCATAGTAAAGAAGGAGCATATCAAGATTCATGGTTTCTAA 342 0.4181 MSEFDTNISTAFDPFAEANADDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYTKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1874 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Amo13g1874 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Amo13g1874 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Amo13g1874 113 Gene3D - 1 113 - -
Amo13g1874 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Amo13g1874 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Amo13g1874 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Amo13g1874 113 SUPERFAMILY eIF1-like 9 113 IPR036877 GO:0003743|GO:0006413
Amo13g1874 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 8 113 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1874 Amo-Chr13 27802072 27804399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1874 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 86.726 5.01e-73 211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1874 13 27802072 27804399 Amo13g1874 13 27802072 27804399 ECH