Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1872 ATGAACGCAGGCAAGAAGGAGGAGGTCCATTCTCGCACCGTCCTGCTCTGCTGCTGCCGCTGCCGTCGATTGGGGTCAAAGCCGTCGCCGTTGCACCCTAGCTGCCGCTGGGAGGAGCCGAATAGGGAGAGGAGGTCGCCATTGCACACGCCGCCACCAGTTACAACCGTCGCCGAAACCAGGACAGATTCACTGGTAATCGCAGCTGATCTTGTTATTCTTCCTCTTCAGTATGCCTTTATCTTTATTAAAAAATATGATAAACAATATGAACACTCAGAGGAGTTCCAGAAAGAGCTCAAAATCAAGGTTCGTGAACTATTAACTGAACAAGAATGGAGGAGAAGAAAAATGCAAATGAGAGTATGCTCTAACTTAAGAAAGGGTTTGTGGGAGTACACAAACATTGTCATGAATTTCCTCTCTGGATCCAGTGAGTTAAATGGAATTACCCCAGACACTGATAAACACATGTTGGCAACACAAACAGGTCTTTCGCGAAACCAGGTGTCGAATTGGTTCATAAATGTTCGAGTCCGAGTGTGA 546 0.467 MNAGKKEEVHSRTVLLCCCRCRRLGSKPSPLHPSCRWEEPNRERRSPLHTPPPVTTVAETRTDSLVIAADLVILPLQYAFIFIKKYDKQYEHSEEFQKELKIKVRELLTEQEWRRRKMQMRVCSNLRKGLWEYTNIVMNFLSGSSELNGITPDTDKHMLATQTGLSRNQVSNWFINVRVRV* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1872 181 SUPERFAMILY Homeodomain-like 125 180 IPR009057 -
Amo13g1872 181 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 153 181 - -
Amo13g1872 181 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 153 181 - -
Amo13g1872 181 ProSiteProfiles 'Homeobox' domain profile. 155 181 IPR001356 GO:0003677
Amo13g1872 181 MobiDBLite consensus disorder prediction 32 55 - -
Amo13g1872 181 CDD homeodomain 155 180 IPR001356 GO:0003677
Amo13g1872 181 Gene3D - 84 181 - -
Amo13g1872 181 Pfam Homeobox KN domain 154 180 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1872 Amo-Chr13 27761536 27764181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1872 109 181 Homeobox Transcription Factor Family AT2G35940 44.595 5.09e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1872 K09528 - gmx:100776581 73.9442