Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1833 ATGCCCAGGCTGTTGGGGAAGAAATTCTTTAAGAAGAAGAAGGTGCCGGTGCAGGTGGACTTGARTAAGAAGAATTGGAAGGAGCAGGTGGATAAGGCGTGTTCGTCGGCGCTTCTGTTTCTTGGAACGGGGACTTGTTGTGTTGTGAAGGTTGCCAAGGTTTCCATGGAGAGCGAGCAGATTGTTGAGAATATGATGGCTGCCATTGAGGGGGTTGTTGAGGTTGTGCCGAAGAAGTGGGCGAATGTGAGGTCCTTGCATGTTAAGCTTTACGAGTCGCTGGCGCTGCCTGTTTTCCAGGCTGTTCCGGAGGTGAAGTTGAGGATTGAGGGAAGTAAGGTTGAGGAGGCGGAGAAAGAGAAGCAGACGATGGAGGAGGAGGAAGAGGGCGAAGACCATAGTGGCGCGAAGGCGGTGAAGAAGAAAAAGGGGAGGATTCATGAAGTTAGATACATGGATAGTGAAGTTGGTGAGGATAATGTTGAAGATTTGGCAGGTAGTGAGGATGATGGTGGTGGTGTTGTTATGGAGGAAGATTTAAAGGACGCTGGAAAAGGTAGTGGAGAATTGGCGAATAAGAAGAGGAAGAAAGGGGCATTGAGTGAGTTGAGCAGTGTCAAAGAATTGAAAAAATCTGTTAAGAGAAGTGGTAAACAGGTTGAGGATGGAGATTCAGGAAAGAAGGGGAAGAATATCAAGAAGAAACTATCTCTATTGAAGTCAGAAGAAGCTGATTTGAAAAAGAAAGTGAGGGCCAAGAAAAGTAAGAAGGCTGCTTAA 780 0.4654 MPRLLGKKFFKKKKVPVQVDLXKKNWKEQVDKACSSALLFLGTGTCCVVKVAKVSMESEQIVENMMAAIEGVVEVVPKKWANVRSLHVKLYESLALPVFQAVPEVKLRIEGSKVEEAEKEKQTMEEEEEGEDHSGAKAVKKKKGRIHEVRYMDSEVGEDNVEDLAGSEDDGGGVVMEEDLKDAGKGSGELANKKRKKGALSELSSVKELKKSVKRSGKQVEDGDSGKKGKNIKKKLSLLKSEEADLKKKVRAKKSKKAA* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1833 259 SUPERFAMILY Ribosomal protein L1 1 99 IPR023674 -
Amo13g1833 259 Coils Coil 107 134 - -
Amo13g1833 259 MobiDBLite consensus disorder prediction 117 236 - -
Amo13g1833 259 Pfam Ribosomal protein L1p/L10e family 1 93 IPR028364 -
Amo13g1833 259 MobiDBLite consensus disorder prediction 174 236 - -
Amo13g1833 259 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 1 157 - -
Amo13g1833 259 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 1 157 - -
Amo13g1833 259 MobiDBLite consensus disorder prediction 117 138 - -
Amo13g1833 259 Gene3D - 40 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1833 Amo-Chr13 26975386 26977606 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1833 1 89 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 31.461 4.30e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1833 K14775 - ahf:112697689 378.637