Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1821 ATGTTGTCTTTGAATGTAGTTTCACCCTCATCATCCAGTGTCACTTTCACCAAACACAATCACAAGTCTTCCATAAATGCATCCACCATTTTCAGGTCAAATCTCCTCAGCAAGGTTCACAGCCACAAGAACCTACCCTGCCTCAGAACCACCACCACTTCCCAGCTCCATGAACAAGGTCACCAAAGTTCCAAGCTTTCTTTCATGCCCACATCTCAGATCCAAGATTCAATTACYAAGTTAGGAACTTTCAACAGGTTCCTCACACACCCTTTTGAGTCCAAAGCAAAACCCATTAACCAAGRTGTGAAAGCAGCTTCTTCTGGTGCCAATCCTGAAGGAGGAGAAGAAAGTGTAGCCCCCAAATCAAAGACCCTAAAGCTTGCACTTGTTTTTGGTCTATGGTACTTCCAAAACATCATCTTCAACATTTACAACAAGAAGGCCTTGAACATTTTCCCATTTCCATGGCTTCTAGCTTCATTCCAGCTATTTGTTGGTTCAATTTGGATGCTAACTCTATGGGCCTTAAAGCTCCAGCCATGTCCAAAAATCTCAAAGCCTTTCATCTTTGCACTTCTTGGACCTGCTTTGTTCCACACAATAGGCCACATCTCAGCTTGTGTCTCATTCTCTAAGGTTGCTGTTTCATTCACTCATGTAATCAAATCAGCAGAACCTGTTTTCTCTGTCATATTCTGTTCTGTTCTTGGTGATAGGTTCCCTATTCAGGTTTGGCTCTCAATTCTACCTATTGTTCTTGGTTGTTCTCTAGCTGCAGTAACTGAAGTGTCTTTCAACTTGCAAGGATTGTGGGGTGCCTTAATTAGCAATGTTGGATTTGTGTTGAGGAATATATATTCTAAGAGAAGTTTGCAGAATTTCAAGGAGGTTGATGGATTGAACTTGTATGGTTGGATTACTATAGTTTCATTGTTTTATTTGTTTCCTGTGGCTGTTTTCATTGAAGGGTCTCAATGGATTCCGGGGTATTATAAGGCAATTGAAGCTATTGGAAAACCATCCACATTTTATATTTGGGTTTTGCTTTCTGGTGTGTTCTACCATCTCTATAACCAATCATCTTACCAAGCCTTGGATGAGATTAGTCCTTTAACTTTTTCYGTTGGGAACACAATGAAGAGAGTGGTGGTGATCGTGTCGTCGGTTTTGGTGTTCAGGAATCCGGTTAGACCACTTAATGGCCTAGGATCCGCCATTGCCATTCTRGGAACTTTCCTGTATTCGCAGGCAACTGCYAAGAAACCAAAGAAAATTGAAGGTGAAAAGAGTAGTTAG 1299 0.4119 MLSLNVVSPSSSSVTFTKHNHKSSINASTIFRSNLLSKVHSHKNLPCLRTTTTSQLHEQGHQSSKLSFMPTSQIQDSITKLGTFNRFLTHPFESKAKPINQXVKAASSGANPEGGEESVAPKSKTLKLALVFGLWYFQNIIFNIYNKKALNIFPFPWLLASFQLFVGSIWMLTLWALKLQPCPKISKPFIFALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFCSVLGDRFPIQVWLSILPIVLGCSLAAVTEVSFNLQGLWGALISNVGFVLRNIYSKRSLQNFKEVDGLNLYGWITIVSLFYLFPVAVFIEGSQWIPGYYKAIEAIGKPSTFYIWVLLSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPVRPLNGLGSAIAILGTFLYSQATAKKPKKIEGEKSS* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1821 432 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 36 425 - -
Amo13g1821 432 SUPERFAMILY Multidrug resistance efflux transporter EmrE 311 418 - -
Amo13g1821 432 PANTHER SOLUTE CARRIER FAMILY 35 36 425 - -
Amo13g1821 432 Pfam Triose-phosphate Transporter family 126 416 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1821 Amo-Chr13 26824465 26825952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1821 42 430 Antiporters AT5G17630 70.660 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1821 K15283 - gmx:100101869 658.677