Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1798 ATGAACCGTGATCATTTCTATTTGAGCGGCGCCGACAGAAGCAAGAACGCAGCCCATCTCAGCCGACGTTACTATCTCATATCCTCACTGGCTCAAGTCGACGTCCGCACCGGTGAACACCCAGAAGCGCATTCTGAGCGTGTGACTCCTTTTGGCGGCACCGCATCACGTCCTTCCGAGCGTGTGGCTCCTTCCGTGGATAATAAAACTAACTGCATTGGTATTGTTAAGACTTTTCTTGTAAATGCCATGCCAAGATTGGATATTACTGAGGTTGGAAGTGAAGAAATGGATATTTGTTACGAGGACATGCCGCTTTTGGGTCTCTCCCAGGTTGGAAGTGAAGAGATGGATCCTGGTCACCAGGTACCGGATCACGATGGCCTTCGGGAAGATGAAATACCTTGTGTTGGAATGCGGTTTGATCAATTGCAAATGGCTCACGAATTTTATGTGACATACGCAAAGAAAGTCGGGTTTGCCACTAAGATACGGACGACAACCTGTGATAAGATCACAAATCAACCCATTAACCAAGATATTCACTGTAATAGGGATGGGTTCCGTGTGTCTCGTGTCAAAGCGTCAATGCGGAAGAACAGGATCTCAGCCGCTGGGTGCAAGGCAAGGATATACGTGAAGTTTGACAAGGAGACGCAAGACTGGGTTTTCTTCAAGGTGGAGCTGAGTCACTCGCACCCATGTTCAGCGAGGAAGGCAGTGCACTACCATGAGTATAGGCAGCTGACCATGCATGCGAAGTGCGTGATCGAGGATAATGATGAGGCTGGGATTCGACCAAACAAGACTTTCCTAGCTTTAGCAAATGAGTTTGGGGGCCCATCTAACCTGGGATACTCAGAAAATGATTTACGAAACTATATTACAGTTAGGCTCCGAACCAGCAACGTCAACGTCGATGTCAGACAGATGATGAACTATTTCATGAGAATGAAGGACATCAATCCAAACTTCTTCTACGCGGTGAATTTGGACGATGACTACCTCTTTGATGATCGACGCATGTGGGTCCCAATATACTTCAAGGGTGAATTTTGGGCTGCCATGAGGAGCACGCAAATGAGTGAGAGCATGCACTCATTCTACGAAAATTTCTTACACAGTCGGACTAGCTTGGTCCAATTTGTTCACGAATATGACAATGTGCTTGGAATTAATGAGCAAAGGGAACTGGAGGATGACGCAGCAGACTCGAGGGGGTTATCCCTTCATGAGTATACTACCTGCATGTTTAGGGATGTTCAAATAGAGTTTGTCAAGAAGGCTAATTGTAGAGTCTCTGTTGTTGCTGAAGAGGGGCCAGTTGTATGCATGAAGGTTGAAGAGGAGATACTAGAGAATGATACTATTCTTTGCATTCTGTACGACGTCCACTTCAATCGATCCACGCAGGAGGTTCGTTGTGAGTGCAATCTATTTGAGAGTTCAGGAGTGTTATGCTGTCATTGTCTTGCAGTCTTCCATTATTACAAGGTGTATAAAGTACCTAATCAATATGTTCTCCCTCGTTGGAGTAAGAACATAAAGCGCAAGCATACTTATGTCAAGAGTAGTCACGACGTCAGTCGGTCGGATGAGAGTCATGATTTTGTAAACGATGACGAAGAAACAGCCTTGCTTCATGCTGCTCTAGAAGAAATAAGAGCTAAGCTGACTGCTCACCATGCCAAGAAGAGGTCCGAGAGTGTGGCGGACTCCCACAACAATATTGGCTCAACAAGTTTGAATGTTTCCGCTGTGATGGACATCCAAGCCCCATCGAAGGTCAACACAAAGGGCCGGCTAAAGAGTAAGAGGCTCGGCGCTGCCCTGGAGAAGTCATTTAAAAAATCTGCTCGGAGGAGAAACAAGCATGACCCCCCGGTGGTTTATCCGGAGCCAACTCAAGATGTAAGATTCGGTGGTGTTGTAGGCCAGGCTGATCCCGAACAAGTTGGTGGCTTCATATTAGCGGAAGAGGCTGGTTTCATGGGGTAA 1998 0.4665 MNRDHFYLSGADRSKNAAHLSRRYYLISSLAQVDVRTGEHPEAHSERVTPFGGTASRPSERVAPSVDNKTNCIGIVKTFLVNAMPRLDITEVGSEEMDICYEDMPLLGLSQVGSEEMDPGHQVPDHDGLREDEIPCVGMRFDQLQMAHEFYVTYAKKVGFATKIRTTTCDKITNQPINQDIHCNRDGFRVSRVKASMRKNRISAAGCKARIYVKFDKETQDWVFFKVELSHSHPCSARKAVHYHEYRQLTMHAKCVIEDNDEAGIRPNKTFLALANEFGGPSNLGYSENDLRNYITVRLRTSNVNVDVRQMMNYFMRMKDINPNFFYAVNLDDDYLFDDRRMWVPIYFKGEFWAAMRSTQMSESMHSFYENFLHSRTSLVQFVHEYDNVLGINEQRELEDDAADSRGLSLHEYTTCMFRDVQIEFVKKANCRVSVVAEEGPVVCMKVEEEILENDTILCILYDVHFNRSTQEVRCECNLFESSGVLCCHCLAVFHYYKVYKVPNQYVLPRWSKNIKRKHTYVKSSHDVSRSDESHDFVNDDEETALLHAALEEIRAKLTAHHAKKRSESVADSHNNIGSTSLNVSAVMDIQAPSKVNTKGRLKSKRLGAALEKSFKKSARRRNKHDPPVVYPEPTQDVRFGGVVGQADPEQVGGFILAEEAGFMG* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1798 665 MobiDBLite consensus disorder prediction 38 64 - -
Amo13g1798 665 Pfam FAR1 DNA-binding domain 149 235 IPR004330 -
Amo13g1798 665 MobiDBLite consensus disorder prediction 614 635 - -
Amo13g1798 665 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 119 333 IPR031052 GO:0006355
Amo13g1798 665 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 335 575 IPR031052 GO:0006355
Amo13g1798 665 PANTHER OS03G0843700 PROTEIN 119 333 - -
Amo13g1798 665 PANTHER OS03G0843700 PROTEIN 335 575 - -
Amo13g1798 665 ProSiteProfiles Zinc finger SWIM-type profile. 462 498 IPR007527 GO:0008270
Amo13g1798 665 SMART 26again6 473 500 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1798 Amo-Chr13 25795609 25799551 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g1798 FAR1 3.7e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1798 - - aip:107640004 791.571