Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1789 ATGGCTTCTTTGACTGATTTGGAGACTATTGTCTATGTTGGAGACAACATGAGGCGGTTCGAGATTCCGATATCATACTTGAACCAACCTTTACTTCGAGAATTGTTGAGTCAAGTTGAAGAAGAATATGGATACGATCATCCAATGGGTGGTCTCACAATTCTGTGCAGTAAGGATGAGTTTTTAAGCATCGATTCTCGCTTGAATGAGATAAGTTTTTTTCTAAATGAGAAAAAACAACACAACACAACTCCCTGGCAATCTGAAGATCAATACTTGAACACCTTCTTCTTAAGCACTAGAGCTTTCCCTTGCTCTTTCCATTCCCTACATACGCAAGAAAAATGGGGAAAGGCATCATTCTCAGCTAAGCAAGCAATTTCAAAATCCGTACAAGTCCCAAAGGGTTATCTTGCAGTGTATGTCGGAGATAATCAAAAGCGTTATTTTGGATATGATCATCTCATGGGAGGTGGATATGATCATCCCATGGGAGGTCTCACAATTCCTTGCAGTGAACATGTATTCCACCAACTCACATCTCCCTTGAGTTGA 555 0.4036 MASLTDLETIVYVGDNMRRFEIPISYLNQPLLRELLSQVEEEYGYDHPMGGLTILCSKDEFLSIDSRLNEISFFLNEKKQHNTTPWQSEDQYLNTFFLSTRAFPCSFHSLHTQEKWGKASFSAKQAISKSVQVPKGYLAVYVGDNQKRYFGYDHLMGGGYDHPMGGLTIPCSEHVFHQLTSPLS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1789 184 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 117 149 IPR003676 GO:0009733
Amo13g1789 184 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 159 183 IPR003676 GO:0009733
Amo13g1789 184 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 10 69 IPR003676 GO:0009733
Amo13g1789 184 Pfam Auxin responsive protein 10 64 IPR003676 GO:0009733
Amo13g1789 184 PANTHER AUXIN-INDUCED PROTEIN 6B 117 149 - -
Amo13g1789 184 PANTHER AUXIN-INDUCED PROTEIN 6B 10 69 - -
Amo13g1789 184 PANTHER AUXIN-INDUCED PROTEIN 6B 159 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1789 Amo-Chr13 25604608 25606601 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1789 11 61 Calmodulin-binding Proteins AT3G43120 50.980 4.76e-10 53.9