Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1782 ATGTTCACCTCAAGGAAGAAAATCCACAAGGATAATGATGCTGAACCCACTGAGTTTGAGGAGACAGTTGCACAGTACGTGTTTGATTTGGAGAACACTAATCAGGACCTGAAAAGTGATTTGAAAGATCTCTACATAAACCAGGCAATTCAAATGGACGTGGCTGGGAATCGCAAGGCTGTGGTCATCTATGTTCCTTTCAGATTGAGGAAGTCGTTCCGCAAAATTCATCTTCGTCTTGTCAGGGAGCTTGAGAAGAAGTTTAGTGGGAAGGATGTTGTGTTGATCGCCACAAGAAGGATTGTGCGTCCTCCAAAGAAAGGGTCTGCTGTTCAGCGGCCCCGTACCCGCACTTTGACTGCTGTGCATGATGCTATTCTTGAAGACGTAGTTTATCCTGCCGAGATTGTTGGCAAACGAGTCAGATACAGACTAGACGGATCAAAAATAATTAAAGTTTTCTTGGATCCGAAGGAACGCAACAACACTGAATACAAGCTGGAGGCTTTCTCTGGAGTTTACAGGAAGCTTACCGGAAAAGATGTATCTTTTGAGTTTCCAATCACAGAAGCCTAG 576 0.4427 MFTSRKKIHKDNDAEPTEFEETVAQYVFDLENTNQDLKSDLKDLYINQAIQMDVAGNRKAVVIYVPFRLRKSFRKIHLRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRTRTLTAVHDAILEDVVYPAEIVGKRVRYRLDGSKIIKVFLDPKERNNTEYKLEAFSGVYRKLTGKDVSFEFPITEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1782 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Amo13g1782 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Amo13g1782 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Amo13g1782 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1782 Amo-Chr13 25549767 25551679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1782 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 78.010 5.19e-113 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1782 K02993 - gmx:100500684 359.377