Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1780 ATGGCAACTATATATACACTCCTTCTTGTGTTCTTAAACAACACAAATCAATTGCATCTCCTCAAGTATCAGTACTCACATATTTCTCTCAATCAAATCCTCCAAGAACAATCGATTTCTTTTTCTTTTGAACAAGAAGAAGAAACAATGGCATTCCGCATTCTAGGTATTAGAAAGGCATCACTTTCTGTATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAGCCTTCATTTCAAGGATTACTAAATCAAGCAGAAGAAGAATTCGGATATGATCATCCAACTGGTGGTCTCACAATTCCATGCTGTGAGGATGAGTTCTTAAATCTCACTTCTCAGTTGGGTGTCCAATAA 414 0.3768 MATIYTLLLVFLNNTNQLHLLKYQYSHISLNQILQEQSISFSFEQEEETMAFRILGIRKASLSVSKGTNVPKGYLAVYVGDKMRRFVIPVCYLNQPSFQGLLNQAEEEFGYDHPTGGLTIPCCEDEFLNLTSQLGVQ* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1780 137 Pfam Auxin responsive protein 60 132 IPR003676 GO:0009733
Amo13g1780 137 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 61 135 IPR003676 GO:0009733
Amo13g1780 137 PANTHER AUXIN-INDUCED PROTEIN 10A5 61 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1780 Amo-Chr13 25532013 25532617 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1780 69 122 Calmodulin-binding Proteins AT3G43120 61.111 1.24e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1780 K14488 - gmx:100786095 136.732