Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1715 ATGGATGTTGATTCCTCGATGGTGCCGGAGGCTAATCACGATCCGGCGGCGCAAAACCACACGGCGGAAAGGGAGCAGCAGCAGCAGTTAAGGGAGTCTCCATCGCCTACGTCGTCGCCGCCGACTTCATCCTCCGTCGACGGGTCTCCGACGCATTCGCCGGCGAATCATCAGCAGCTGCAGGCGGCAGCTCAGGTGCAGCAGAGTCCGGTGGTTGGTCCGAGGTTGGCGCCAACTTACTCGGTGGTTGACGCGATTCTGGAGAAAAAGGAGGACGGTCCAGGGCCAAGGTGTGGCCACACGCTAACGGCGGTGGCTGCGGTTGGAGAAGAAGGCGCACCAGGGTACATTGGTCCGCGGTTGATTCTGTTTGGCGGTGCCACCGCTCTGGAAGGGAATTCCGCAGCGTCAGGAGCTCCTGCTTCCCCTGGAAATGCTGGCATACGTTTAGCTGGTGCGACAGCTGATGTCCACTGTTATGACGTCTTAACTAAGAAATGGTCTAGGATAACTCCTTTTGGAGAGCCTCCAACCCCAAGAGCTGCACATGTGGCGACTGCTGTGGGAACAATGGTAGTTATTCAGGGTGGCATTGGTCCAGCTGGTTTGTCAGCTGAGGACCTTCATGTTCTTGATCTGACACAACAACGGCCACGATGGCATAGGGTTAATGTTCCAGGACCTGGACCAGGGCCACGTTATGGACATGTTATGGCTTTGGTGGGGCAGCGGTATCTCATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTAGCCGATGTATGGGCCTTAGACACAGCAGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCGCCTCCATGCATGTATGCAACCGCAAGCGCACGCTCTGATGGGCTGCTTCTGCTTTGTGGAGGGCGGGACGCCAATAGTATTCCACTAGCTAGTGCATATGGACTTGCTAAGCATAGGGACGGTCGTTGGGAGTGGGCAATTGCTCCTGGTGTCTCACCATCTCCAAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGGCTCCACGTGTCTGGTGGGGCTCTTGGTGGAGGACGGATGGTAGAAGACTCATCAAGTGTTGCAGTGTTGGACACTGCCGCTGGTGTATGGTGTGATACAAAATCTGTTGTTACCAGCCCAAGAACAGGTAAATTCAGTGCTGATGCAGCTGGTGGTGATGCCTCAGTTGAGTTGACACGGCGTTGCAGACATGCAGCTGCTGCTATTGGTGACCTAATTTATATTTATGGTGGATTACGTGGTGGGGTCTTGCTGGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACACCTGCTGCTTCACATGCTGCTGCGGCAGCAGCTGCATCTAATGCACAAGTTGGACGATTACCTGGAAGATATGGATTTGTTGATGACAGGACAAGGCAAACAACGCTGGAAGCAGCACCTGATGGTTCAGTTGTTTTGGGTAACCCGGTTGCTGCCCCTGTAAATGGTGACATGTACAGTGATATCAGCACTGAAAATGCCATGCTTCAGGGACCTAGGCGAACTACCAAAGGAGTTGAGTATCTGGTTGAAGCATCAGCTGCAGAAGCAGAAGCTATCAGTGCCACGCTGGCAGCGGCAAAAGCACGGCAGGAGAATGGAGAAGTTGAGTTGCCTGACAGAGATCGTACAGCTGAGGCTACCCCTAGTGGCAAACAAATATCTTCTCTGATTAAGCCTGATTCTGCAGGAGCAAATAACATCACTCCTGGTGGAGTTAGACTGCATCACAGAGCTGTGGTGGTTGCTGCTGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCCATTGATCAGTTTGAAAATGAAGGCAGACGGGTTAGTTATGGGACTCCAGAAAGTGCAACTGCTGCTAGAAAATTATTAGATCGGCAGATGTCTATCAACAGTGTCCCAAAGAAGGTCATAGCACATCTGTTGAAGCCCCGTGGCTGGAAACCACCAGTTCGCCGGCAGTTTTTCTTAGATTGCAATGAACTTGCGGATCTTTGTGATAGTGCAGAGCGTATATTTTCAAGTGAACCAACTGTCTTACAACTTAGGGCACCAATTAAAATATTTGGTGATTTACATGGGCAATTCGGGGATCTTATGCGGCTCTTTGATGAGTATGGAGCTCCGTCAACTGCTGGTGACATAGCATATATCGATTATCTATTTCTTGGAGATTATGTTGATAGGGGCCAACACAGCTTGGAAACTATAACCCTTTTGCTTGCTCTGAAGGTTGAGTATCCTAGCAATGTACATTTGATACGCGGAAATCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGGATTGAGTGCATTGAGCGAATGGGTGAGAGAGATGGTATTTGGGCATGGCATCGGATAAACCGTCTGTTTAATTGGCTTCCTCTGGCTGCTCTAATTGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGTCGCTCAATAAATCATTTGGAACAGATTCAAAATATTCAGCGTCCAATTACGATGGAAGCAGGATCGATTGTACTTATGGATCTGTTGTGGTCTGATCCTACAGAGAATGATAGTGTGGAAGGGCTGCGGCCAAATGCTAGAGGTCCGGGTTTAGTTACTTTTGGGCCGGACCGTGTGATGGAATTTTGCAACAACAATGATCTTCAGCTGATTGTTCGAGCACATGAATGTGTTATGGATGGCTTTGAGCGCTTTGCCCAGGGGCATCTGATCACTCTTTTTTCAGCTACAAACTACTGTGGTACTGCAAATAATGCTGGGGCAATATTAGTTTTAGGTAGAGATCTTGTGGTGGTTCCTAAATTGATCCACCCATTACCACCTGCAATTTCTTCACCCGAAACATCACCGGAGCGTCATATTGAAGATACGTGGATGCAGGAATTGAATGCCAACAGACCACCGACACCAACTAGAGGCCGTCCTCAAGTAACAAATGACCGGGGTTCTCTTGCTTGGATATAG 3036 0.4951 MDVDSSMVPEANHDPAAQNHTAEREQQQQLRESPSPTSSPPTSSSVDGSPTHSPANHQQLQAAAQVQQSPVVGPRLAPTYSVVDAILEKKEDGPGPRCGHTLTAVAAVGEEGAPGYIGPRLILFGGATALEGNSAASGAPASPGNAGIRLAGATADVHCYDVLTKKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVNVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSIPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGKFSADAAGGDASVELTRRCRHAAAAIGDLIYIYGGLRGGVLLDDLLVAEDLAAAETTPAASHAAAAAAASNAQVGRLPGRYGFVDDRTRQTTLEAAPDGSVVLGNPVAAPVNGDMYSDISTENAMLQGPRRTTKGVEYLVEASAAEAEAISATLAAAKARQENGEVELPDRDRTAEATPSGKQISSLIKPDSAGANNITPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNELADLCDSAERIFSSEPTVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPSNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHLEQIQNIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRGSLAWI* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1715 1011 MobiDBLite consensus disorder prediction 987 1002 - -
Amo13g1715 1011 MobiDBLite consensus disorder prediction 556 570 - -
Amo13g1715 1011 Gene3D - 78 202 IPR015915 GO:0005515
Amo13g1715 1011 MobiDBLite consensus disorder prediction 1 69 - -
Amo13g1715 1011 CDD MPP_Bsu1_C 660 962 IPR041758 -
Amo13g1715 1011 Gene3D - 203 463 IPR015915 GO:0005515
Amo13g1715 1011 MobiDBLite consensus disorder prediction 987 1011 - -
Amo13g1715 1011 PIRSF STPPP_BSU1 37 1011 IPR012391 GO:0004721|GO:0009742
Amo13g1715 1011 Pfam Kelch motif 410 437 IPR006652 GO:0005515
Amo13g1715 1011 Pfam Kelch motif 338 384 IPR011498 GO:0005515
Amo13g1715 1011 PRINTS Serine/threonine phosphatase family signature 776 800 IPR006186 GO:0016787
Amo13g1715 1011 PRINTS Serine/threonine phosphatase family signature 743 770 IPR006186 GO:0016787
Amo13g1715 1011 PRINTS Serine/threonine phosphatase family signature 708 735 IPR006186 GO:0016787
Amo13g1715 1011 PRINTS Serine/threonine phosphatase family signature 844 871 IPR006186 GO:0016787
Amo13g1715 1011 PRINTS Serine/threonine phosphatase family signature 814 840 IPR006186 GO:0016787
Amo13g1715 1011 PRINTS Serine/threonine phosphatase family signature 926 942 IPR006186 GO:0016787
Amo13g1715 1011 PRINTS Serine/threonine phosphatase family signature 904 924 IPR006186 GO:0016787
Amo13g1715 1011 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1005 - -
Amo13g1715 1011 MobiDBLite consensus disorder prediction 554 593 - -
Amo13g1715 1011 ProSitePatterns Serine/threonine specific protein phosphatases signature. 777 782 IPR006186 GO:0016787
Amo13g1715 1011 MobiDBLite consensus disorder prediction 571 586 - -
Amo13g1715 1011 SUPERFAMILY Kelch motif 152 441 IPR015915 GO:0005515
Amo13g1715 1011 SMART pp2a_7 680 964 IPR006186 GO:0016787
Amo13g1715 1011 Pfam Galactose oxidase, central domain 232 285 - -
Amo13g1715 1011 SUPERFAMILY Metallo-dependent phosphatases 665 971 IPR029052 -
Amo13g1715 1011 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1005 - -
Amo13g1715 1011 MobiDBLite consensus disorder prediction 21 69 - -
Amo13g1715 1011 Gene3D - 644 983 IPR029052 -
Amo13g1715 1011 Pfam Calcineurin-like phosphoesterase 708 915 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1715 Amo-Chr13 24401075 24412876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1715 672 907 Calmodulin-binding Proteins AT5G63870 29.412 2.16e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1715 - - zju:107403943 1758.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0748 18 10550865 10563023 Amo13g1715 13 24401075 24412876 PCT
Amo13g1715 13 24401075 24412876 Amo18g0748 18 10550865 10563023 PCT