Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1699 ATGGGGTTTTTGTTGAAAGAAGCTTTGAAGACTCTCTGTGCTCGGAACCAGTGGTCTTATGCGGTGTTTTGGAAGATCGGATGTAATAATTCCAAGCTGTTAATCTGGGAAGATTGCTACTACGAACCCTTGCCGTCTCCTTTTCCGGCAAGCGTTGCCGGGGAGGGAAGCTGGTTTTCTTCGGAGTCTCAGTTGTCGCAGCTAGGAATTCAGGACGAGGACAGAGTCTGTTCTTTGATTAACAAAATGATGGTGAATAATTCAGTCAATATAGCTGGTGAAGGGATAATTGGACGGGCAGCATTTACGGGAAACTACCAGTGGATTCTATTGAACAATTTTACAAGAAATGCATATCCACCTGAGGTGTATACTGAGATTCATCACCAATTCTCAGCTGGAATACAGACAATAGTGGTTATTCCTGTGCTTCCGCATGGTGTTGTTCAACTTGGTTCTTTTTTACCGATAATGGAAAATATTGGATTTGTGAATGATGTGAAGAGCTTGATCTTACAATTGGGATGTGTTCCTGGTGCCCTTTTATCTGATGATTACTCAGCAAAACTTTCTACCATAAGTCTTGGAAAACCTGCTAATGTCGGTATACCTGTGTCTGTTGATCCACCAGTTGTTACCCCAAACTGCCCTCCTTTTATAGCCGGTGGCTCGAACCAAGCAAGTAATTCATCTCATGTTCCAAAGTCTATTGTTCAACACATAAATAATTATGACGGTTTGATAGTGACGCCTCAAAGCCGTAACATAAACCAGATATCATCCAAATACCATAATGAACCTTGTAAACCTAATGACCACTCAATAACCAAAACAAACGTCAGTGGCCAACAAGAGAGTATGGTTGTGAAGGCTGAAGCTGAATTGATGCCATCAAATTTCAGTTCATGTATGCAAAAGCAATCTGGTTCTTATAATACAAGATCTGCATACAATGATTTAGCCAGTTTCCGCCAACCAAGTCTCGGTGATTGCAGCCTTAAATACATGGAACAGCAAATCTTATCTGGAGTTGGGAGACAAAGTCATGTTAGTCCTAATATGAACACATCAAGCACCTTAAATATGGCTCAACTGAAAACAAATAGCAGCCGTATTCTCGGATGTGTCCACAGTTCTCCAAATTCTTCAGTTCTTGGAGGAGTCCCAACATCTGGTGGCATGACTAATCTTATGAGGACAGAAAATGTTGGCGTTGGACTTAAAAATGATAGATCAACTAGAGCTGGCATGCATTCTGTGTCTAATTTGACCAATCAATCAGTAACCACTCACATGCCTTCAGAAGATTCTAATCAGAAGAATCATGCTGTTGATTTGAAGCGTGCTTATGATGCTCTGGCTTCGTTGGATCAAGGGCTAGATGATGTGATGCTTCAGGACTTTAAAATCCCATTTCTTCATCTTGAGGATCATGTATCCATGAACGATCAGATCTCGGGGTTTGTTGGTGATTGTCTCATTAAGGATGCTACTAGTCAACATATGATGGGAAATGCTAAACATGAAGAAGCTTGCACTCAACCTCCATCGAGTGACGACCTCTTTGATGTTTTAGGTGCAGATTTTAAAATGAAACTGCTGAATGGAAACTGGAATAAGTTGCTTGCTGATGAACCAGATGCCGGTGCTGAAAACTTAGATAACAAGCCAACATACATGAATATGCATGGAGCTCCACATTATAGTAGATCGATAAGCGAAACAATATCAAGCAGTGGTATCATCTCTGCCACCTGCACTGACAACCTCTTAGATGCTGTGATCTCAAGGGCTCAATCTGCTTCTGCCGGGAAACAGAATTCCGATGATATGTCATGCAGGACAACAGTGACAAGGACTAGTACCTCCTCAACTCCCTCTCCGGCCTGTAAACAAGTTCTGTTTGATGTTCCCAAGACGGGGGACAAGATAGGTTCAGCCGAAACCAGTTCTGCTAAGAACACTTCCATTTATGGATCTCAACTTAGTTCCTGGATTGAGAATGGGAGCAGTGTGAAGTGTGAGAACAGCGTTTCGACTGGATACTCTAAGAAGCCAGATGAAGGTAAATCAAACCGTAAAAGGCTCAAGCCTGGGGAGAACCCCCGCCCTCGACCCAAAGATCGCCAAATGATTCAGGATCGTGTGAAAGAGTTACGCGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATTCACTCTTGGAAAGGACTATTAAGCACATGCTTTTCTTGCAAAGTGTAACGAAGCACGCCGACAAGCTGAAACAAACTGGGGAGTCTAAGATTATTAGTAAGGAAGGTGGATTGCTTTTGAGAGATAATTTCGAGGGAGGAGCGACATGGGCGTATGAGGTTGGTTCACAGTCAATGGTTTGCCCTATCATAGTCGAGGATCTGAGTCCCCCGCGTCAGATGCTAGTTGAGATGCTTTGCGAGGAGCGCGGTTTCTTTCTCGAAATAGCCGACTTAATCCGAGGACTAGGCTTAACCATCTTAAAGGGTGTCATGGAAACTCGCAATGACAAGATTTGGGCGCGCTTTGCTGTTGAGGCAAATAGGGATGTAACAAGGATGGAAATATTCATGTCGCTGGTTCGTCTTTTGGAGCAAACAGTGAAGGGAAATGCATCTTCATCGAATGCAGTCGACAACATGATGGCTTATCATTCTTTTCCACAAGCTACCCAGATACCAGCGACCGGTATGCCTACTAGTTTGCAATGA 2727 0.4305 MGFLLKEALKTLCARNQWSYAVFWKIGCNNSKLLIWEDCYYEPLPSPFPASVAGEGSWFSSESQLSQLGIQDEDRVCSLINKMMVNNSVNIAGEGIIGRAAFTGNYQWILLNNFTRNAYPPEVYTEIHHQFSAGIQTIVVIPVLPHGVVQLGSFLPIMENIGFVNDVKSLILQLGCVPGALLSDDYSAKLSTISLGKPANVGIPVSVDPPVVTPNCPPFIAGGSNQASNSSHVPKSIVQHINNYDGLIVTPQSRNINQISSKYHNEPCKPNDHSITKTNVSGQQESMVVKAEAELMPSNFSSCMQKQSGSYNTRSAYNDLASFRQPSLGDCSLKYMEQQILSGVGRQSHVSPNMNTSSTLNMAQLKTNSSRILGCVHSSPNSSVLGGVPTSGGMTNLMRTENVGVGLKNDRSTRAGMHSVSNLTNQSVTTHMPSEDSNQKNHAVDLKRAYDALASLDQGLDDVMLQDFKIPFLHLEDHVSMNDQISGFVGDCLIKDATSQHMMGNAKHEEACTQPPSSDDLFDVLGADFKMKLLNGNWNKLLADEPDAGAENLDNKPTYMNMHGAPHYSRSISETISSSGIISATCTDNLLDAVISRAQSASAGKQNSDDMSCRTTVTRTSTSSTPSPACKQVLFDVPKTGDKIGSAETSSAKNTSIYGSQLSSWIENGSSVKCENSVSTGYSKKPDEGKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDSLLERTIKHMLFLQSVTKHADKLKQTGESKIISKEGGLLLRDNFEGGATWAYEVGSQSMVCPIIVEDLSPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMETRNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKGNASSSNAVDNMMAYHSFPQATQIPATGMPTSLQ* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1699 908 MobiDBLite consensus disorder prediction 686 711 - -
Amo13g1699 908 CDD bHLH_AtLHW_like 700 769 - -
Amo13g1699 908 MobiDBLite consensus disorder prediction 676 711 - -
Amo13g1699 908 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 696 745 IPR011598 GO:0046983
Amo13g1699 908 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 908 - -
Amo13g1699 908 MobiDBLite consensus disorder prediction 600 630 - -
Amo13g1699 908 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 170 IPR025610 -
Amo13g1699 908 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 908 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1699 Amo-Chr13 23894408 23900812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1699 518 893 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 56.104 6.01e-117 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1699 - - aip:107629784 1762.27