Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1693 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAACAGATCGGAAGAGGTGCTTTTGGAGCTGCCATCCTTGTTCATCACAAATCTGAGAAGAAAAAATATGTGTTGAAGAAAATCAGGCTTGCTAGGCAGACTGAAAGATGCAGAAGATCTGCACATCAAGAGATGGCTCTTATTGCTAGAATCCAGCATCCTTACATTGTAGAATTCAAGGAGGCATGGGTTGAGAAGGGTTGCTATGTCTGTATTGTTACTGGATACTGTGAAGGAGGAGATATGGCCGAATTGATGAAGAAAACAAATGGTGCTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAGTTACTCTTGGCAGTGGAATATCTTCATTCAAATTTCGTTTTACATCGTGACCTAAAGTGTTCCAACATTTTTCTTACCAAGGACCAAGATGTTCGCCTCGGGGATTTTGGGCTCGCTAAGACGCTAAAAGCAGATGATTTGGCTTCATCGGTGGTCGGGACTCCCAATTACATGTGTCCTGAACTGCTTGCGGATATTCCTTATGGATTCAAATCTGATATCTGGTCACTAGGGTGCTGTATATATGAGATGGCTGCTCATCGCCCGGCTTTTAAAGCTTTTGATATGGCAGGACTAATAAGCAAGATAAACCGTTCCTCTATTGGCCCGTTGCCTCCTTGTTATTCCCCTTCCTTGAAAACACTGATAAAGGGCATGCTAAGAAAAAGTCCGGAGCATCGGCCAACAGCATCAGAAGTGTTAAAGCACCCTTACTTGCAAGCTTATGTTGATCAATATCGTCCGTCTTTTAGTTCTCCAACATCATGTTCTCCAGGAAAACCGATTTCAGCTGTCAATTATTCTAGAAAAAATATGGCTGAAAGTCAAAGCAGTACTAGTTCAAGCAGTGACAAAGACAGTTTGATGTCACATGAGAGACACATTGCAACATCAGTGCCTGAGCATAACAAAGCCACCGAAACAGATATGGCATCAATTGATGACGATAGCTCAGAGAATCTCCTGGCTAGTGAAGAAGAAAACGGCTCTAATAATGTCAATGCTAAAGCAACTGAGCAAGAAGTGACGAAACCATCTTATAATGAGCCATGTTCTAATATTGAATCTAAGCAGCCGAAAACAATTAGAAGTATAATGATGGCGTTAAAAGAAGGAAAACTTAGAGAAGCAACTTCTCCGATGAGAGGCAATCGCATAAAGGTTGGTGGTGTATCAACACCGAAGACTAATATAGAGACGTTGTCCAAATTGCCAAAACCCAATTTCACAGCTCCTGGATTGAAGCCAAATGTAGAGTCCCCAGCTGTTGCGCATCCAAAGGGATCCCCGGACTCTGTAAAACGAATACAAGGATTGCATCCTTCAAAGCATCAGTTGCCAGTGACAGAATCCTCACCAAAAGCGAAACCTAGGCACGACTTGACTTCGCCATCTGGCAATGTCAAACCAGTAGAGGGAGAAGGACTTCCTGATAGAACATTGCAAAGGACTCCCCCTACCTTAACTAGACGACCTTCATTTCCGGCTCGAATGAGGCCAGTTGGGCTTGATGTTCCGAATGCAACAAATGATAATGGGAAGTCAGGTTCAAATAGAACAGCTCAGGAGCCCGACATTAGCCGTCAGTTGATCAATGGCAATGTACCACATCTTTCTAGACCAGCTGCTAGAGAGCCTCAGAAGGCTTTTGGCCGAAGCTCCAAAGGAATGCAAACAGACAGCAGTAATTCCGCATCATCTTCGGTCTCTATTCAAGGATGTGAAATTTATGATGATGCAACAATTTTTATTGACATGAGAGAAGAAACACTTCCTGATAGCGAGAATGTACTCCACGATGTAGGTGCAGAATCATGCCCACCTACAACCTGTGCACATTGTAAGAAGGTTGAAAACGTTTGCAACAAGACTGGCGAGGTTACCTGGAGTTTTCGGAACACTAATAGTAATGAGAAAATGGATTCAAGGATAAGTCTTGATCTCCCTATTGAAGATTCTGAGGTTACTTCTGCATCAGAAGATAGCCTTCCTGTTAAACATACAAGTATCAATGTTTCCTTTGGATCTGATAATAAATCTGTAGGCCCTCGTGTTGAAGCCGCAGAGGAAATCATAGATCATCATGATATTTCTAAGGAAATAACATTAGCCACAACTATCCAACATCCACTTGAAAGTTCTGCAGAAAAGCCGGTTTATGGCGGTGTTCTTCCACTAAGGAAGTCTGAAGGTAAGTCCGAAATCGTTTGTCAGCCGGAACCCATGTGTAAGTCCTCTGGGGACGACAAATCCACAATGAGGGAGCGATTATCATCAGTGTCTGAAACTGCTCCGCTGATTACATCTACTAAGCTATCGAGCCAGAAAGTCTTGCAAGAGAAAGGAACTGTTGTGCAGAATTCAGCACCGGAAAAGCCAGATGCTGGCCATCTCCCTCCGGCCTTTGATGTCATCCATGTAATACGGCATAGCAGTTACCGGGTTGGAAATGAGCAGCCAGTTAAGGAATCTGTTGAGAAAGGAGTTCAAAATTTAGATGTTGGTAAGTTCATCAATGTTGTGAGGGATGATGTAGAAGCAAGAAATTCAAGCCCTCCTTTGACATTGAAATCTTCTAGTTCCTCTGAACCTCCGAGCACGAAACCAAATACTTCTGATCAGTTCGAAACAAGAAACAATGGCACTCTGCCAATCGTTAAATCTCCAAGTTTATATGATGCTTCATGCATGAAATCAAGTGTGTCTGATCATCCTGGTCTTAAGGAACAAGACAAAAGCAACCCGGTTTCATTAGTTTCAGAATCTAATTCCACCGAGTTAAGTAAACACGATACTCCTACAACCGAAGACAAACCTCCGGCGAAGGAAATACTGGATGTGAAATCTTTCAGGCAGAGAGCCGAGGCACTCGAAGAGCTCCTAGAATTGTCTGCGGAGTTGCTGCAGCAAAATAGATTGGAGGAACTTCAAGTTGTTCTGAAGCCCTTCGGGAAAGACAAGGTTTCGCCAAGGGAGACAGCGATTTGGTTAGCGAGAAGTCTTAAAGGAATGATGTCCGAGGAATGCGGAGGACGCGGTTCATGA 3114 0.4338 MESRMDQYEIMEQIGRGAFGAAILVHHKSEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKTNGAYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKSPEHRPTASEVLKHPYLQAYVDQYRPSFSSPTSCSPGKPISAVNYSRKNMAESQSSTSSSSDKDSLMSHERHIATSVPEHNKATETDMASIDDDSSENLLASEEENGSNNVNAKATEQEVTKPSYNEPCSNIESKQPKTIRSIMMALKEGKLREATSPMRGNRIKVGGVSTPKTNIETLSKLPKPNFTAPGLKPNVESPAVAHPKGSPDSVKRIQGLHPSKHQLPVTESSPKAKPRHDLTSPSGNVKPVEGEGLPDRTLQRTPPTLTRRPSFPARMRPVGLDVPNATNDNGKSGSNRTAQEPDISRQLINGNVPHLSRPAAREPQKAFGRSSKGMQTDSSNSASSSVSIQGCEIYDDATIFIDMREETLPDSENVLHDVGAESCPPTTCAHCKKVENVCNKTGEVTWSFRNTNSNEKMDSRISLDLPIEDSEVTSASEDSLPVKHTSINVSFGSDNKSVGPRVEAAEEIIDHHDISKEITLATTIQHPLESSAEKPVYGGVLPLRKSEGKSEIVCQPEPMCKSSGDDKSTMRERLSSVSETAPLITSTKLSSQKVLQEKGTVVQNSAPEKPDAGHLPPAFDVIHVIRHSSYRVGNEQPVKESVEKGVQNLDVGKFINVVRDDVEARNSSPPLTLKSSSSSEPPSTKPNTSDQFETRNNGTLPIVKSPSLYDASCMKSSVSDHPGLKEQDKSNPVSLVSESNSTELSKHDTPTTEDKPPAKEILDVKSFRQRAEALEELLELSAELLQQNRLEELQVVLKPFGKDKVSPRETAIWLARSLKGMMSEECGGRGS* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1693 1037 MobiDBLite consensus disorder prediction 420 592 - -
Amo13g1693 1037 MobiDBLite consensus disorder prediction 338 376 - -
Amo13g1693 1037 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 1020 - -
Amo13g1693 1037 Gene3D Transferase(Phosphotransferase) domain 1 90 371 - -
Amo13g1693 1037 MobiDBLite consensus disorder prediction 294 376 - -
Amo13g1693 1037 SUPERFAMILY Protein kinase-like (PK-like) 4 315 IPR011009 -
Amo13g1693 1037 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 1020 - -
Amo13g1693 1037 MobiDBLite consensus disorder prediction 936 952 - -
Amo13g1693 1037 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1693 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Amo13g1693 1037 CDD STKc_Nek 7 262 - -
Amo13g1693 1037 Coils Coil 974 1000 - -
Amo13g1693 1037 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Amo13g1693 1037 MobiDBLite consensus disorder prediction 870 964 - -
Amo13g1693 1037 MobiDBLite consensus disorder prediction 575 592 - -
Amo13g1693 1037 MobiDBLite consensus disorder prediction 309 323 - -
Amo13g1693 1037 MobiDBLite consensus disorder prediction 294 308 - -
Amo13g1693 1037 MobiDBLite consensus disorder prediction 874 909 - -
Amo13g1693 1037 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1693 1037 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1693 1037 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Amo13g1693 1037 MobiDBLite consensus disorder prediction 531 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1693 Amo-Chr13 23596549 23602892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1693 12 286 MAP Kinase Kinase Kinase AT3G06030 31.359 1.68e-36 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Amo13g1693 Pkinase 1.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1693 K08857 - gmx:100818747 1396.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0689 18 9506779 9512708 Amo13g1693 13 23596549 23602892 PCT
Amo13g1693 13 23596549 23602892 Amo18g0689 18 9506779 9512708 PCT