Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1647 ATGGCTAACTCCTCCTTCTGCCTCCTCCTCTTCATTCTCTTCTGCTTCCTCTCTTCTGTTACTATCATAAATACACTTTCAACTGTTTCCATCTCCGAGACTTCCAACCAAACATTTATTTGTGCCTTACAGAATCCCAACCGACAAGTACAAGGACAATCTAACCTTAACTGTACAAGCTTTCCACCTGGAATCTCTCTTCAACTGAATCGTAACCTCTCATATGCTGAAATTGCTGGTGGCAGTGGATTCCTATGTGCATTGAGGACACCATCTTCTTCTAACTCCATCATGGGTTGTTGGAGATTCTCTGCCAATGCTACCAATGTTCCTTTCAAGCGTGTCTACCATGGACCTGTAATTCAAAACATGGATGCCGGAAACTCCCATGTTTGTGGCCTTGTAACTCAGAACAATAATAGCCTTAAGTGCTGGCAATGGCCTCGCTTCGATTCAAGCAAGGTCACCAACTTGTCAAGTATTGCTGTGGGAGAGAATTTTGTCTGCGGCTTATCGGAGTCATCAGGCAAGGTTACTTGCAGTGGTGGTGATACCGGAGTTGTTGGTAAGGAGCCTGGTGGCGCGCACTCTGCCATTGCAGCCGGGTTTAGGCATGCTTGTGCCATCTCCATCGATGGAAGCTTGGATTGCTGGGGTGACGTGGATCAGAAACCGCAGGGTAAGTTTGTTGATTTGGCCTTGGGAGAGAACCGAAGTTGTGCACTTAGAGATAATAGAACTGTTGCTTGTTGGGGACAGAATAATTTCAGGATTCCAAAGAGATTTGAAGGGACTTTCTTTGTGGCAATTGTGGCAAAACGAAGTGTTTTCTGTGGAATTGTGTATTCTAATTTTAGCTTGGTATGTTGGGGTGCTAAGTTTTTTGATACAAATGCTGAGGTGTTTGAAAATGTCCTCCCTGGACCTTGTAGGAGTAACTGCCCATGCGGAATCTTACTAGGCTCTGCCACACTATGCTCTTCAGGAATGTCAATTTGTACATCTTGTTCCCCAAGAAATAAGACTGGTTCGCCCTCGCCATCGCCACCACCCACAAGTAGTCCGACCGGGACTACAAAAAGTAGTGGATGGAGCAAGAAGATGGTTGCATTCTTGGTGGTTGGATGTGTTGGTTGCAGTTCCCTGCTGCTAGTGTTTTGTTTCTTCATTTACTGGCACTGCAAGGGTAAAGGAGGCCGCGTCCACGACTCTGGGCGATTGGATGAATCAGGGACTGGGAGCGCCTCGCCAAGCCACCCGGAAGGTGGAGGCGGCCGTGGAGTTCTAGAGAAGCGTTTAAGCCACGTGATCAGCTTGGGAAACGGGAGCCATTTGGAGGAATACAGCCTTCAAGTGCTTCTTGAAGCGACCAACAATTTCTCAGAGGACAAGAAAATAGGGACAGGTAGCTTTGGGTCTGTATACCATGCCACACTGCAAGAAGGCAAGGAAGTCGCCATAAAAAGAGCCGAAAACTCTCCCCATTCGCCCTCCAATGCCACCAGAAGGCAGGAAGACAAGGACAGTGCATTTGTGAACGAGCTAGAGAGCCTCTCTAGGCTCCACCACAAGAATCTGGTGAGGCTATTGGGGTTCTATGAGGACGCCAACGAGCGCATATTGGTTTACGAGTACATGAACAATGGAAGCTTAAACGAGCATCTCCACAAGCTTCATACTTCAACATTAATGTCTTGGGCCGTGCGCATCAAAGTAGCACTTGATGCAGCAAGAGGCATAGAGTACCTTCACCAATACGCAACCCCACCAATCATTCACCGCGACATAAAATCATCAAACATACTGTTAGACTCAAAGTGGACTGCCAAAGTTTCTGATTTTGGACTCTCACTCATGGGTCCTGAAGACGAAGAGTCGCATCTTTCGCTCCTTGCGGCCGGCACAGTTGGTTACATGGACCCTGAATACTACAGGCTTCAAATGCTAACTACAAAGAGCGATGTCTACAGTTTCGGAGTAGTGCTCCTGGAAATTCTGTCTGGCCACAAGGCCATACATAAAAATGAGAATGGAGTCCCAAGAAACGTGGTGGATTTCATGGTGCCATATATTAATCAAGATGAGCTTCACAGGGTGCTGGACCCAAGAGTGCCGCCGCCAACGCCCTACGAGATAGAGGCGGTGGCGTACGTTGGTTATTTGGCAGCAGATTGTGTGAGGCTGGAGGGCAGAGATCGTCCAACAATGACTGAAGTTGCAAATTACTTGGAAAAAGCATTGGCTGTGTGTTTGGCGAAACCATCCATGTCAAGATCCACAACCAACACTTCTGATGAATGA 2301 0.475 MANSSFCLLLFILFCFLSSVTIINTLSTVSISETSNQTFICALQNPNRQVQGQSNLNCTSFPPGISLQLNRNLSYAEIAGGSGFLCALRTPSSSNSIMGCWRFSANATNVPFKRVYHGPVIQNMDAGNSHVCGLVTQNNNSLKCWQWPRFDSSKVTNLSSIAVGENFVCGLSESSGKVTCSGGDTGVVGKEPGGAHSAIAAGFRHACAISIDGSLDCWGDVDQKPQGKFVDLALGENRSCALRDNRTVACWGQNNFRIPKRFEGTFFVAIVAKRSVFCGIVYSNFSLVCWGAKFFDTNAEVFENVLPGPCRSNCPCGILLGSATLCSSGMSICTSCSPRNKTGSPSPSPPPTSSPTGTTKSSGWSKKMVAFLVVGCVGCSSLLLVFCFFIYWHCKGKGGRVHDSGRLDESGTGSASPSHPEGGGGRGVLEKRLSHVISLGNGSHLEEYSLQVLLEATNNFSEDKKIGTGSFGSVYHATLQEGKEVAIKRAENSPHSPSNATRRQEDKDSAFVNELESLSRLHHKNLVRLLGFYEDANERILVYEYMNNGSLNEHLHKLHTSTLMSWAVRIKVALDAARGIEYLHQYATPPIIHRDIKSSNILLDSKWTAKVSDFGLSLMGPEDEESHLSLLAAGTVGYMDPEYYRLQMLTTKSDVYSFGVVLLEILSGHKAIHKNENGVPRNVVDFMVPYINQDELHRVLDPRVPPPTPYEIEAVAYVGYLAADCVRLEGRDRPTMTEVANYLEKALAVCLAKPSMSRSTTNTSDE* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1647 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 591 603 IPR008271 GO:0004672|GO:0006468
Amo13g1647 766 ProSitePatterns Protein kinases ATP-binding region signature. 466 488 IPR017441 GO:0005524
Amo13g1647 766 Pfam Protein kinase domain 460 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1647 766 Gene3D Phosphorylase Kinase; domain 1 429 545 - -
Amo13g1647 766 SUPERFAMILY Protein kinase-like (PK-like) 440 744 IPR011009 -
Amo13g1647 766 PANTHER OJ000114_01.11 PROTEIN 7 755 - -
Amo13g1647 766 SMART serkin_6 460 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1647 766 ProSiteProfiles Protein kinase domain profile. 460 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1647 766 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 7 755 IPR044815 GO:0004674
Amo13g1647 766 Gene3D - 27 188 IPR009091 -
Amo13g1647 766 Gene3D - 191 360 IPR009091 -
Amo13g1647 766 Pfam Regulator of chromosome condensation (RCC1) repeat 198 220 - -
Amo13g1647 766 Pfam Regulator of chromosome condensation (RCC1) repeat 230 256 - -
Amo13g1647 766 Gene3D Transferase(Phosphotransferase) domain 1 546 757 - -
Amo13g1647 766 CDD STKc_IRAK 466 745 - -
Amo13g1647 766 MobiDBLite consensus disorder prediction 339 362 - -
Amo13g1647 766 MobiDBLite consensus disorder prediction 403 427 - -
Amo13g1647 766 MobiDBLite consensus disorder prediction 488 508 - -
Amo13g1647 766 SUPERFAMILY RCC1/BLIP-II 112 295 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1647 Amo-Chr13 22667412 22670190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1647 25 761 Receptor kinase-like Gene Family AT5G47850 51.969 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Amo13g1647 Pkinase 7.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1647 - - pvu:PHAVU_011G003100g 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1647 13 22667412 22670190 Amo13g1647 13 22667412 22670190 ECH