Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1637 ATGGGTTCTTCTAATAACGGTGGTGTGCCACCGGGGTTTCGATTTCATCCAACTGATGAGGAATTGCTTCATTACTACTTGAAGAAGAAGGTGTCGTTTCAGAAGTTTGACATGGATGTTATTAGAGAGGTCGACCTCAACAAGATGGAGCCTTGGGACTTGCAAGAAAGATGCAGAATAGGGTCAACACCACAAAACGAGTGGTATTTCTTCAGCCACAAGGATAGAAAGTACCCAACAGGGTCAAGGACAAACCGAGCAACGAACGCAGGGTTCTGGAAAGCCACGGGAAGAGACAAGTGCATAAGGAACACCTACAAGAAGATTGGGATGAGAAAGACACTAGTGTTCTACAAAGGTAGAGCCCCTCATGGCCAGAAGACTGATTGGATCATGCACGAGTACCGCCTTGAAGATTCCAATGATCCTCAAGCAAATGCCAACGAAGATGGGTGGGTGGTGTGCAGGGTGTTCAAGAAGAAGAACCTATTCAAGATTGGAAATGAAGGAGGTGGTGGCTCCACACACACCTCATCGGACCAGCAACTCAACAACTCAACGGCCACCAATGCTCGTTCCTTCATGCAAAGGGAAAACCACTACCTACTGCATCACCACCAACAACAGCAAAACCCTAGGAATGGGAACCCATCGTCTTCATCCTCAGGCTTTGATGAGCTCGATAAACCCGAACTCGGTCTCCATCACTATCCTCACATGCAAAACCCACACTATTCACTCTTCCATCACTCCCAACCACTTCTTCATCCCCAGGCCCACAAGCCCATCGTCTATGACTACTCTTATACACCCGCGCTTCCCTCAGACCCTCCTGTCATCGCTAAGCAGCTCATGACTAACCCTAGAGACTGCGATAGCGGTGGCAGCGAGGGTCTGAGGTACCAGCAGGTTTCCGAGCCTGGTATGGAGGTTGGATCATGTGAACAAGCCCAGGAAATGGGCGCCGCCGCGGCCACAAGAGGAGGAGGAGAAGGAATGAATGAATGGGGTGTGCTTGATAGGCTTGTAACCGGGAACCTTGGAAATGAAGATTCAGCCAACAAAGGGATTAGGTTTGAAGATGCAAATCCACACCAGATTAACCAGCTTTCTTTGAGGGGAGAGATGGATTTCTGGGGCTATGGAAAACAATAA 1155 0.49 MGSSNNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDSNDPQANANEDGWVVCRVFKKKNLFKIGNEGGGGSTHTSSDQQLNNSTATNARSFMQRENHYLLHHHQQQQNPRNGNPSSSSSGFDELDKPELGLHHYPHMQNPHYSLFHHSQPLLHPQAHKPIVYDYSYTPALPSDPPVIAKQLMTNPRDCDSGGSEGLRYQQVSEPGMEVGSCEQAQEMGAAAATRGGGEGMNEWGVLDRLVTGNLGNEDSANKGIRFEDANPHQINQLSLRGEMDFWGYGKQ* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1637 384 MobiDBLite consensus disorder prediction 204 238 - -
Amo13g1637 384 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Amo13g1637 384 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 250 - -
Amo13g1637 384 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Amo13g1637 384 PANTHER PROTEIN BEARSKIN2-LIKE 5 250 IPR033519 -
Amo13g1637 384 ProSiteProfiles NAC domain profile. 9 160 IPR003441 GO:0003677|GO:0006355
Amo13g1637 384 SUPERFAMILY NAC domain 8 160 IPR036093 GO:0003677|GO:0006355
Amo13g1637 384 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1637 Amo-Chr13 22356866 22359182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1637 3 380 NAC Transcription Factor Family AT1G33280 51.421 3.43e-122 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo13g1637 NAM 2.9e-37 No_clan