Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1628 ATGACGTCAACACCTACGCCACCACGCCACGCCGACCCCTCCTCCTCTTCCTCTTCCTCTTCCGCCAAGTTCAGGCTTCAGAAGATTCCTCCGATTCCGTTCCGAAGGAAGTCCAAATCTAAGGCCGAAGCAAATAGATTGGCCGAGGAAGAACATAAAAAGCAGCAGCAGAAGCTGCAGCAGGAGAAGCAAGAACAACAACAAAAACAAAGCAAGGTGCAGAAAGACATGCAGGATTGCGATTCCGGAGAACCCTCCATTCTTCTCGCGTCTTCTTTAGGGCTTAATCAAATTCGCACTCGCTCTTCTTCTTCCCCTCTCCGCCATTGCTCCTCCGTTGGCGCCTCTTCCTTTCTCACAAACGACGTCGTCTCAAACATTGACCACATTCCTACAACCAAACCTACTAAGGAACCATGGGAGAAAGTTCATTGGAGTCAATCCAAATCGTTGAAGGCTCATTCTCAGCTGCTTCCTGTTCTGGAGGGTAATCATGCAGCTTTTGCCAAAGAAATGAATTCCCCACGTTTTCAGGCAATCCTGCGTGCAACAAGTGGCCGCAGAAGGACACAACCTGATATCAAAAGCTTTTCCCATGAACTCAACTCCAAAGGTGTTCGACCTTTTCCAATTTGGAAACACCGTGCATTAGGCCATATGGAGGAAGTCATGGTGGCAATTAGAGTTAAGTTCGAAAAATTGAAGGAAGAAGTTGATTCGGACTTGGGTGCTTTTGCCGGAGATTTGGTGGGTATTCTTGAAAAAATTTCAGGGTCTCATCCTGAATGGGCAGAGAGCTTGGAGGATCTCTTGATTGTTGCTCGACAATGTTCAAAGATGTCAGCTACCGAATTTTGGGTCAAGTGTGAAACTATTGTTCAAAATTTAGATGACAAACGTCAAGATTTACCTGTGGGGATCCTCAAGCAAGCTCACACACGCCTACTTTTTATCCTCACTCGTTGCACCCGTCTTGTGCAATTCCACAAGGAAAGTGGCTATGAACAAGATCACATTCTGGGTCTTCACCAGCTCAGCGATCTTGGTGTATATCCAGAGGAGCTGTTGCAGGCTGCACAGCAAAATGCTGATGCTCCAATTGGTGGACATGACATGGCTGACCTGCGGAAAAAGTCAAAAGGAAAAGAGAAAAACAAATTAAAGACTACGAAATCTCAAGCTAACGAACAAAGAGTTATGAGTGGCAATGCGGAGGAGGATAGTACAACAAAAAATAGTTCCACTCCAAATAGCTATAGGATGGCTTCTTGGAAAAGGTTTCCAGCAGCTATTGACAAAAAGCAAAAGGATGAAGATGATGGAGATTTCCCCTCAAAAGGTGATATGGATCATTCGCTGGTCAAAGAACAGAATTCTGAAAATTTGGATGCTATGTCATGTCAACCTGAACATTCTGTGTCATCGTCAAGGACACGAAAGGGTTCTTGGGGATTCTGGGGAGATCAACAAAATCTAACATATGAAGATTCAATGATCTGCAGAATTTGTGAGGTTGAAATACCAATTGTACATGTGGAGGAGCATTCTCGAATATGCACAATTGTTGATAGATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTTGAAAGAGTTTCTGATACTATTGAAAAGATATTGGAATCCTGGACACCTAAAAGCACCCAAAGTACCGAAATTGCAGGAGACAGTTTTGAGGTTTCTAGAATGTCTACATCAAGTGTGCATGAAGAGTTCAGTGAGTTAACTCTAGAAAGAAATAACATCTCTTCTAGATGCTCTGAAGACATGCTTGACTCTACCAATGAAACTGACAATACATTTGTTATGGATGATGTGCACCTCCCATCCGAAATATCGTGTGAACCGCATATCTATTTAAAATCTGATCATGGGACAAAAATATCTTCAACTGGAAGCTTGACACCAAGATCCCCTTTGATAACACCACGAACCAGTCAGATAGAAGTGTTATTAAGTGGAAGAATAGCAATATCTGAATATGAGAGTTACGACCAGATTAATAAGCTAGTGGAAATAGCTCGTTCTGTTGCAAATGTGAATGCCTGTGACTACAGTTCTTTGGAGATTATGCTTGATCGCTTAGAAGACCTGAAATATGCAATTCAAGACAGAAAAGTGGATGGCCTCATTCTGGAGACTTTTGGACGACGTATAGAGAAACTTCTACAGGAGAAATATATATCTCTTTGTGGGCAGATAGAAGATGAAAAGGTAGACTCGTCAAATATCATGGCTGAAGAAGAGAGTGCAGTGGAAGATGAAGTTGTACGTAGCCTTCGTGCTAGTCCAATTAATCCTTGTTCCAAGGACCGAACCTCTATAGAAGACTTTGAAATAATAAAGCCAATAAGTAGGGGTGCATTTGGACGAGTTTTTCTTGCCCGGAAAAGGGCAACTGGTGATTTATTTGCTATAAAGGTTTTGAAAAAGGCAGATATGATACGTAAAAATGCAGTTCAAAGTATTTTGGCTGAGCGAGACATCCTCATATCTGTTCGAAATCCTTTTGTGGTCCGATTTTTCTACTCTTTCACATGTAGAGAAAATCTCTATCTGGTTATGGAGTATTTGAATGGTGGAGATCTTTATTCTCTGTTAAGAAATTTAGGTTGCTTAGATGAAGATATGGCTCGTGTCTATATTGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATACCTTAAATGTGATTCACAGAGATTTGAAGCCAGATAACTTGTTGATTGGTCAAGATGGTCACATTAAGTTGACTGATTTTGGACTCTCTAAAGTTGGTCTTATCAACAGCACAGATGACTTATCAGCACAATCATTTTACAATAATGGTTTTCTAAGAGATGATGAACTAAAACCTCAACATTATTCTAAAAGGGAAGGACGTCGAAAGCATTCAATAGTTGGCACCCCAGATTATTTGGCACCAGAAATACTTCTTGGGATGGGACATGGTGCAACTGCAGATTGGTGGTCCGTGGGTGTGATTCTTTATGAGCTTATTGTGGGTATTCCACCATTCAATGCAGAACATCCCCAGCAAATTTTTGATAACATAATCAACAGAGATATACAATGGCCCAAGGTTCCTGAGGAGATCAGCTTTGAAGCATATGATTTGATTAACAAATTATTGAATGAAAATCCAGTCCAAAGGTTAGGTGCAACAGGAGCTACAGAGGTTAAACGCCACTCGTTCTTCAAGGATATTAATTGGGATACTTTAGCAAGGCAGAAGGCTATGTTCATACCATCAGCTGAAGCTCTTGATACAAGTTATTTTATGAGCCGGTACATTTGGAATCCAGAGGATGAACATTGTACTGGGGGTAGTGACTTTGATGACATTAGTGAAACAAGCAGCACCTCTGGCAGCGACTTATTAGATGAAGATGGTGATCAATGTGGTAGTTTGGCAGAATTCAGTGCTCCTCCTCTTGAGGTGCAATACTCCTTTAGCAATTTCTCATTTAAGAACTTGTCTCAGCTAGCATCTATCAATTATGATCTGGTGATTAAGAACTCCAAAGAATCGCCCGATAACTCCAATCCATCAGTTTCATGA 3582 0.414 MTSTPTPPRHADPSSSSSSSSAKFRLQKIPPIPFRRKSKSKAEANRLAEEEHKKQQQKLQQEKQEQQQKQSKVQKDMQDCDSGEPSILLASSLGLNQIRTRSSSSPLRHCSSVGASSFLTNDVVSNIDHIPTTKPTKEPWEKVHWSQSKSLKAHSQLLPVLEGNHAAFAKEMNSPRFQAILRATSGRRRTQPDIKSFSHELNSKGVRPFPIWKHRALGHMEEVMVAIRVKFEKLKEEVDSDLGAFAGDLVGILEKISGSHPEWAESLEDLLIVARQCSKMSATEFWVKCETIVQNLDDKRQDLPVGILKQAHTRLLFILTRCTRLVQFHKESGYEQDHILGLHQLSDLGVYPEELLQAAQQNADAPIGGHDMADLRKKSKGKEKNKLKTTKSQANEQRVMSGNAEEDSTTKNSSTPNSYRMASWKRFPAAIDKKQKDEDDGDFPSKGDMDHSLVKEQNSENLDAMSCQPEHSVSSSRTRKGSWGFWGDQQNLTYEDSMICRICEVEIPIVHVEEHSRICTIVDRCDLKGLTVNERLERVSDTIEKILESWTPKSTQSTEIAGDSFEVSRMSTSSVHEEFSELTLERNNISSRCSEDMLDSTNETDNTFVMDDVHLPSEISCEPHIYLKSDHGTKISSTGSLTPRSPLITPRTSQIEVLLSGRIAISEYESYDQINKLVEIARSVANVNACDYSSLEIMLDRLEDLKYAIQDRKVDGLILETFGRRIEKLLQEKYISLCGQIEDEKVDSSNIMAEEESAVEDEVVRSLRASPINPCSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAEVVLALEYLHTLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAQSFYNNGFLRDDELKPQHYSKREGRRKHSIVGTPDYLAPEILLGMGHGATADWWSVGVILYELIVGIPPFNAEHPQQIFDNIINRDIQWPKVPEEISFEAYDLINKLLNENPVQRLGATGATEVKRHSFFKDINWDTLARQKAMFIPSAEALDTSYFMSRYIWNPEDEHCTGGSDFDDISETSSTSGSDLLDEDGDQCGSLAEFSAPPLEVQYSFSNFSFKNLSQLASINYDLVIKNSKESPDNSNPSVS* 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1628 1193 Coils Coil 44 76 - -
Amo13g1628 1193 ProSiteProfiles Protein kinase domain profile. 785 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1628 1193 SMART serkin_6 785 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1628 1193 MobiDBLite consensus disorder prediction 370 391 - -
Amo13g1628 1193 MobiDBLite consensus disorder prediction 1 25 - -
Amo13g1628 1193 MobiDBLite consensus disorder prediction 1119 1134 - -
Amo13g1628 1193 Gene3D Phosphorylase Kinase; domain 1 783 1100 - -
Amo13g1628 1193 MobiDBLite consensus disorder prediction 36 60 - -
Amo13g1628 1193 MobiDBLite consensus disorder prediction 458 480 - -
Amo13g1628 1193 ProSitePatterns Serine/Threonine protein kinases active-site signature. 904 916 IPR008271 GO:0004672|GO:0006468
Amo13g1628 1193 CDD STKc_MAST_like 791 1078 - -
Amo13g1628 1193 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 21 1192 - -
Amo13g1628 1193 MobiDBLite consensus disorder prediction 1115 1135 - -
Amo13g1628 1193 MobiDBLite consensus disorder prediction 363 480 - -
Amo13g1628 1193 MobiDBLite consensus disorder prediction 1 86 - -
Amo13g1628 1193 MobiDBLite consensus disorder prediction 392 421 - -
Amo13g1628 1193 ProSiteProfiles AGC-kinase C-terminal domain profile. 1074 1173 IPR000961 GO:0004674|GO:0005524|GO:0006468
Amo13g1628 1193 SUPERFAMILY Protein kinase-like (PK-like) 782 1101 IPR011009 -
Amo13g1628 1193 Gene3D Transferase(Phosphotransferase) domain 1 869 1091 - -
Amo13g1628 1193 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 1192 - -
Amo13g1628 1193 MobiDBLite consensus disorder prediction 427 457 - -
Amo13g1628 1193 Pfam Protein kinase domain 785 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1628 Amo-Chr13 22170609 22177425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1628 2 1192 AGC Kinase Gene Family AT5G62310 60.916 0.0 1440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Amo13g1628 Pkinase 1.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1628 - - gmx:100817975 1763.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1628 13 22170609 22177425 Amo13g1628 13 22170609 22177425 ECH