Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1605 ATGGCAGAATCGCAAGAAGAACGTGTTTCAAGCGAGGGTCCTCCTTTATGCACATCACCTACCCGAAATTTATTAATGGAGGTAGATATAGTTGAACCGTTAATTTGTGTAGCCTCTGATGTTTCAGAAAATTTATCATACGAACATGAATACTTAGCCGACGATGTCGTAGGCCACGGTCACAAGTCAAACAAGGCCACGCAGTTGTCGGATGTTACGGATGTTGGAAGTGAAGAGATGGAGCTTGATGATGAGTTACCAGATCATGGTTGCCTACAAAAAGACGAGATACCAAGAGTTGGAATGCGGTTTACTCAGTTACAGATGGCTCATGACTTTTATGTTACCTATGCAAAGAAAGCTGAATTTGCAACTAAGATAAGGACGACAACATTTGACAAGATCACAAAGGCTCCCGTTAACAAAGCTATACACTGTAATGGCGACGGGATCCGCGAGTCTCGTGTTAAAGCACCAACGCGGAAGAATATGATTTCAACTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGACGTGCAAGACTGGGTTTTGTTCAAGGTTGACTTGACGCACTCACACCCCTGTTCACCAAGAAAGGCAGTGCACTACCACGAGTATAGGAAGCTGACCATGCATGCGAAGTGCGTGATCAAGGATAATGATGAGTGTATCATAACCGATCAATGTCGATCCATTTACTGTGCGATCAAAAATACTTTACCCGACACACGCCATCGGTGGTGCATCTGCCATATTATGAATAAATTACCTTCCAAGCTTGGGGATTATTGCCGGTACGGAGCTTTGTATGGTGACCTAAACGACATTGTGTGA 843 0.4365 MAESQEERVSSEGPPLCTSPTRNLLMEVDIVEPLICVASDVSENLSYEHEYLADDVVGHGHKSNKATQLSDVTDVGSEEMELDDELPDHGCLQKDEIPRVGMRFTQLQMAHDFYVTYAKKAEFATKIRTTTFDKITKAPVNKAIHCNGDGIRESRVKAPTRKNMISTAGCKARIYVKFDKDVQDWVLFKVDLTHSHPCSPRKAVHYHEYRKLTMHAKCVIKDNDECIITDQCRSIYCAIKNTLPDTRHRWCICHIMNKLPSKLGDYCRYGALYGDLNDIV* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1605 280 Pfam MULE transposase domain 213 258 IPR018289 -
Amo13g1605 280 PANTHER OS03G0843700 PROTEIN 76 210 - -
Amo13g1605 280 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 76 210 IPR031052 GO:0006355
Amo13g1605 280 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 218 269 IPR031052 GO:0006355
Amo13g1605 280 Pfam FAR1 DNA-binding domain 112 199 IPR004330 -
Amo13g1605 280 PANTHER OS03G0843700 PROTEIN 218 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1605 Amo-Chr13 21709007 21711593 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g1605 FAR1 4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1605 - - ahf:112733025 405.601