Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1594 ATGAAAGGAGGTCAAGTATTTGCTGTGAAAAAATTGAAATGTGATGAAGAAAACTTAGACACTGAAAGCATGAAGACATTCAAGAATGAGGTAGCAGCCATGAATGAAATTCGCCACCGGAACATTGTAAAGCTCTGCGGATTTTGCCCTGAAGGATTACACAAATTCTTGGCCTACTTCTTCTATTGGCCCATAACCAATGCAACTACAGCATAA 216 0.3935 MKGGQVFAVKKLKCDEENLDTESMKTFKNEVAAMNEIRHRNIVKLCGFCPEGLHKFLAYFFYWPITNATTA* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1594 71 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 1 61 - -
Amo13g1594 71 SUPERFAMILY Protein kinase-like (PK-like) 3 59 IPR011009 -
Amo13g1594 71 Pfam Protein tyrosine and serine/threonine kinase 7 52 IPR001245 GO:0004672|GO:0006468
Amo13g1594 71 Gene3D Phosphorylase Kinase; domain 1 1 61 - -
Amo13g1594 71 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1594 Amo-Chr13 21518427 21518673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1594 3 69 Receptor kinase-like Gene Family AT4G21400 44.776 2.93e-12 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo13g1594 PK_Tyr_Ser-Thr 7.6e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1594 - - adu:107477534 108.227