Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1588 ATGGGGAGGGGCAAGAGACTACTGTCTTTGTTACCTCGGCGGATGCTGGGATTGTTCCACAATCCACAGATCAAGCCCAATTTTCTGACCTCCTTGATGCATCAGTCCTTGCTGACCCTTGTTGCTGTCGCCGACGACGCGGAAGCCAAGCTTTTTCCCCTATCCGGATCTGCCAGCTGTAACGTGGCGGAGTGGATGCATCACTTCCATGATGTGATGTACCGTTTGTCCATGTTGCTGTGGGATAGATTATTTGCAAATGCATTTGCGGATTTTGAACCTGATTGGGAGTTCATACTCCAAAAAATCGAAGTCATGACAAAGCAGAAGCATCTTCTTCTGCTGACCGAGAAATTACAAGGTGAGAAAGATCAAGAGCAACAGCAAAGATCTTCGTATCTGAAGGCTGATGTTTACGGAAGAGAAAAAGAAAAGAATGAGTTGGTTGACTATTTGCTATCTGATCGATCCAGTGGTACCGTTGGCAACACGTCTGTGATTGCAATCGTGGGCGTTGAAGGGATCGGTAAGACCACCTTTGCTGAAATTGTCTACAACGACGACCGAGTCAAGGCCTCTTTCGAACTCCGAGGCTGGGTGGACTATCAAGAGGGTATTGATGCTGTGAGTCTGGGGAATATTGTTCTTGATAGTTTCGACGAGGACTTTCTTTGTTCAGATGGTTTAAAGGAGGTGATTGGTCGTCTAAGGAGGTGCTTGAACGGGAAGAAGTTTTTGCTGGTGCTTGATAGAACTCAGTCTCTTACAGCCTGGGAAACCCTTTGGGCATGTTTTGCTGATGCTGCTGTTGGAAGTGCGGTCATCTTCACCACATCAAAGCTAGAGGCTGCATTAGAGGTGCGTTCCAATCAAGTTCTACATCTGGGCTTATTATCTCTGGAAGACTCGTGTTCATTGTTTTCAGATCATGCTTTTGGAGATGGAAACCAGAATGAACATCTCGAATTTGTGACCGTGACTAAGCAAGTTGTGAGAAAGCTCGGAGGGCTGCCTATTGCTGTCAAGAAACTTGGTAGTGTCTTGTATGACTACCAAGACTTGTACGCATGGAGAGAGCTGCTCAAGATTAATCGATCACATTTGTTAGACTTGAGTGACTTTAGTCTCCCCATTCAGTTCTCAAGATGCCGTCCATACAACTTTCACAATATGGTTCGACTCGAAATAGTAGGCGCTTGGAGGTTAAATCTGCCGAATGAGTTTGGAGAGCTAAGATGCCTTGAGTACCTTGACCTCTCTTTCTGTGAAGTACGGAGATGGCCAAATTCAGTGACTCCCCTATCTCGTTTGCACACTTTAAAGTTGTCTTTTGGGGAATATCCTCCAATACTAGGTGTTATTTTGCCTTTTGTTAACTTACATTATCTGGATATCACAGGCAGAAGTAACTTTCCAATATGGTTGCCTATAGAGCTGGGGGAAATGAAAATCCTCCAAACGCTACTTGGTTTTGCAGCGAACAAGGATTCTGGGTCTAATTTGGTAGTGTTGGCTAGTCTTCCAAGCATCAGAACACTGAGCATTACAGAGTTGCAAAATGTGGTGGATGCTACCTGTGCCTCACTAGCAAATTTGAAGGGAAAAAGGTATCTAGAAAATCTTACCTTGCGATGGAATCAGTTGTGTGCTCCTGAATTAAAACAAGCACCAGAGCATTTGCAGCCACCAGGACAGCCCAAATTTCTTGAGACCCTGGGTCTGTCTGAATGCGAAAGATCACTAGAGTATTTGGAACCTCCAGAACAGCTGAAAATGCTCGAAATTTTGGGCTGTCCAGATAGAATATTTCCAAATTGGTTGGGGGATTCGTCATTCAGGACATTAGAGGTCCTACATCTTCGTGACTGTAGAAATTTCCCTTTCTTGCCACCACTTGGGCAACTCTCATCTCTTAAAGAGCTCTCTATTCAAGGGTGTGACAATGTAAGATCGGTAGGCAGTGAGTTCTATGGGCATTGTACTTCATATGTACCATTTAAATCTTTGGAGGTCTTGTGGTTTGTGGACATGACAAACTGGAAAAAGTGGATTCTTTTAGATGATGGAAGGCTTCATTTTCCTTGCCTCCGTGAGCTCTACTTGATACATTGCCCAGAGTTGCAGCAAGACTTGCCCAAGCACCTACCTTCTCTTAAAAAGATTGAAATAATTAAGTGTGATCGTCTTGTGGCTCCCCGACCAAAGATACTTGACAAGCATGAATTACTGGTACAAGAACAAGAAAAGGGAAAGGAAAAGGACTGTGATGATATTGTTGCTACAAGTGCCGCTGAATGTGAAAAGGAAAAGGACTGTGATGGTATTGTTGCTACAAGTGCGGCTGAACCTAATGAATTTAATTTCATAATGGAACCTATTATTAGAGAAGTTGATGAACCAGTAGTAGATGATGATGAGGATGATGGTAACAACGATGTCATGCTAGATTTTGAGTACTCTTTTAATATTTTAAAAGTTGCCGATGCATCAGAGCTTTGCAATTTGCCAGGTGAATTAAAAAGCCTTAGGATTGAAGGTTGCCAGTTTCTTGAGTCCCTACCCAATCAGTTTTTGAAATATTGTCCAGATATCTTCGAGTTGTTTTTGGTTGATTGTTGCTCTCTGAAGCACTTTGCAGATGTTCTACACCCTAAGTCCCTGAGAACACTTCATATCCGCAAATGTCCAGTTTTAGAGTTCATCATTCCTCTTGGAGTACACAAGAAGTTTAAACTCTTGAAACATCTTTTTATTAGTAGCAGCTGTGAATCTCTTACATCCATCTCCATAAACCTTTTCCCAAGACTCCAAACTCTCTATATCAAGGATTGTCCCAATCTCAAGTCGTTTTCAGTGGCTCAGGGACTTCGTGACCAAAATCTGAAGCTCGAGTCTTTGGAAATCCGAGACTGCCCTAACCTGATATCCTTTCCAGAAAGAGGATTGCCTACTCCTAGTCTCAAAACAATGACAATATCTAACTGCAGAAGTTTGAAGTCTTTGCCCAATCGTTTCTTAACTCTTACATCACTTCAGTCATTGCTTATAGACAAATGTCCAGAACTTGAGTCTTTCCCAGATGGGGGTTTGCCATCCACTTTAAGTTTAATTTCAATTGCTTTTTGTGACAAACTTACACCACAGAAGGAGTGGAAGTTGAATACGCTTTGCTCATTAACTTGTTTCGAGATTGAAGGTGGGTGCATTGGCATGAAATCATTTCCAGAGAAGGATCTTCTTCCTAGAAATCTCAAGTCTCTGCGCATCAGCAAACTCTCAAGTCTGAGAGTCTTGAATGGCACAGGGCTTCAGCATTTGACTGCTCTTGAGACATTGGAGATTAACTGCTGCCACGGACTCATCTCCTTGCCAGAAGGGTTGCCATCATCCTTGACTTGTCTTTGTATCAAAGAATCATCAATATTGATCCACAAACTCTCGTATAAAGCAGGGGAAGAGTGGAGCAAGGTAGCTCATATCCCTAACATACAAATTGATGATGATGCAGGTCATGGAGTTAACAAAGAAACAATAATTCCAGGGAAGGAAGTTGAAGCTGCATCATTAAGTTTTAAGCAGCCACAACCAAAGAGAGGGTTCTGA 3603 0.428 MGRGKRLLSLLPRRMLGLFHNPQIKPNFLTSLMHQSLLTLVAVADDAEAKLFPLSGSASCNVAEWMHHFHDVMYRLSMLLWDRLFANAFADFEPDWEFILQKIEVMTKQKHLLLLTEKLQGEKDQEQQQRSSYLKADVYGREKEKNELVDYLLSDRSSGTVGNTSVIAIVGVEGIGKTTFAEIVYNDDRVKASFELRGWVDYQEGIDAVSLGNIVLDSFDEDFLCSDGLKEVIGRLRRCLNGKKFLLVLDRTQSLTAWETLWACFADAAVGSAVIFTTSKLEAALEVRSNQVLHLGLLSLEDSCSLFSDHAFGDGNQNEHLEFVTVTKQVVRKLGGLPIAVKKLGSVLYDYQDLYAWRELLKINRSHLLDLSDFSLPIQFSRCRPYNFHNMVRLEIVGAWRLNLPNEFGELRCLEYLDLSFCEVRRWPNSVTPLSRLHTLKLSFGEYPPILGVILPFVNLHYLDITGRSNFPIWLPIELGEMKILQTLLGFAANKDSGSNLVVLASLPSIRTLSITELQNVVDATCASLANLKGKRYLENLTLRWNQLCAPELKQAPEHLQPPGQPKFLETLGLSECERSLEYLEPPEQLKMLEILGCPDRIFPNWLGDSSFRTLEVLHLRDCRNFPFLPPLGQLSSLKELSIQGCDNVRSVGSEFYGHCTSYVPFKSLEVLWFVDMTNWKKWILLDDGRLHFPCLRELYLIHCPELQQDLPKHLPSLKKIEIIKCDRLVAPRPKILDKHELLVQEQEKGKEKDCDDIVATSAAECEKEKDCDGIVATSAAEPNEFNFIMEPIIREVDEPVVDDDEDDGNNDVMLDFEYSFNILKVADASELCNLPGELKSLRIEGCQFLESLPNQFLKYCPDIFELFLVDCCSLKHFADVLHPKSLRTLHIRKCPVLEFIIPLGVHKKFKLLKHLFISSSCESLTSISINLFPRLQTLYIKDCPNLKSFSVAQGLRDQNLKLESLEIRDCPNLISFPERGLPTPSLKTMTISNCRSLKSLPNRFLTLTSLQSLLIDKCPELESFPDGGLPSTLSLISIAFCDKLTPQKEWKLNTLCSLTCFEIEGGCIGMKSFPEKDLLPRNLKSLRISKLSSLRVLNGTGLQHLTALETLEINCCHGLISLPEGLPSSLTCLCIKESSILIHKLSYKAGEEWSKVAHIPNIQIDDDAGHGVNKETIIPGKEVEAASLSFKQPQPKRGF* 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1588 1200 PRINTS Disease resistance protein signature 166 181 - -
Amo13g1588 1200 PRINTS Disease resistance protein signature 239 253 - -
Amo13g1588 1200 PRINTS Disease resistance protein signature 334 348 - -
Amo13g1588 1200 PRINTS Disease resistance protein signature 982 998 - -
Amo13g1588 1200 Gene3D Ribonuclease Inhibitor 358 526 IPR032675 -
Amo13g1588 1200 PANTHER OS05G0414200 PROTEIN 406 977 - -
Amo13g1588 1200 PANTHER OS05G0414200 PROTEIN 31 383 - -
Amo13g1588 1200 PANTHER DISEASE RESISTANCE PROTEIN RP 31 383 IPR044974 GO:0006952
Amo13g1588 1200 PANTHER DISEASE RESISTANCE PROTEIN RP 406 977 IPR044974 GO:0006952
Amo13g1588 1200 Gene3D - 120 293 IPR027417 -
Amo13g1588 1200 SUPERFAMILY L domain-like 344 729 - -
Amo13g1588 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 369 IPR027417 -
Amo13g1588 1200 Gene3D Ribonuclease Inhibitor 528 741 IPR032675 -
Amo13g1588 1200 Gene3D Ribonuclease Inhibitor 814 982 IPR032675 -
Amo13g1588 1200 Pfam NB-ARC domain 143 362 IPR002182 GO:0043531
Amo13g1588 1200 SUPERFAMILY L domain-like 833 1140 - -
Amo13g1588 1200 Gene3D Ribonuclease Inhibitor 983 1146 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1588 Amo-Chr13 21433862 21439802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1588 167 348 WRKY Transcription Factor Family AT5G45050 26.776 7.47e-09 58.5