Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1584 ATGGTGGTCGATGTGGCAAGTGCTTTGCTCTCTGCCTCCCTGCAAGTCTTGATTGACAGGTTAGCTTCTCCTCAGCTTCTGTTCTTCTTTCGCAACAAGACCTACGAAGCTGCCGAGGATTTGAAGCTGCAGTTACTCTCAGTGAACTCTGTCCTCGTGGATGCAGAGGAGAAGCAGATCGTCAACCCATACGTCAAGATATGGCTCAACGAGCTTCGAGAAGCTCTCTACTCTGCCGAAGATCTTCTTGATAAGCTTGACACTCAGGTTTTGGAATACAAGGTGAGGTCTCAGTCACACACCACATTGGACACTGTAATAGACTACTTTGATTCTGTTTCTCCTTTCGCTAAGTCGTTGAATCGTAGCCTTGAGAAAATAAATCTCAGGCTTCATGTTTTGAGAGACTATCAAAACTGTTTGGGCCTTAGGGAAGTCCCACAGAATCTGTTCCCACTGCTACCTAATGTGCCTACTACTAGAAGGGTGGATTGGGCTAGGGTTTATGGCAGGGACAGTGTAAAAGAAACAATCATACAAGGTATGCTTGGAACCATGAATGAGGAAGTTGAACCAATTGTTGTGGCAATTGTTGGGATGGCAGGGGTTGGCAAAACTACTCTGTCTCAGGTTTTGTTCAGCGATGAACATGTAACGCGAAACTTCCATATACGGTCTTGGGTTTATGTCTCTGAGGGTTCTGATGTTCTCTACTTAACCACCAAGGTTTATGAGTCATTGACGGGTTCTAGTGTTGGGAGTACAAGCTTGGACAGACTTCAAGACCAAGTAGCATCTTTGTTGAGTGGAAAGAACTTCTTGTTGGTTTTAGATGATTTTTGGGCTGAGAGTTTCTTTGACTGGGAACTCTTCAAGATGGCCTTTATGGATGCTGCTATTAGATGTGTTATTCTAGTCACCACCCGCAATGAAAATGTGGCAATCACTATGCGTGCTGCTGTTTATTTCCTTTCACATCTACCGGATGATGATTGTTGGAACATCTTTGCTCATTATGCATTTGGGAACAGAAATCCGGAGCCAACTTTGTTGGAGATTGGTCACAGGATAGTGAGAAAGTGCAAGGGTCTTCCTTTAGCTGCAAAAGTGCTTGGGAGTGTTTTACATTCAGTGACAGAAGCTGAAGAATGGAATAACATACTGCAAAGTAAGATGTGGGATTTGCCGGCTAATAAGAGCAACATCTTGGCTGCATTAAGATTAAGCTATCAACTTCTTCCTTCACATTTGAAGGCCTGCTTTGCCTACTGCTCCATATTTCCCAAGGGATATGAAATTAAGAAGTTGAACTTGATCCATTTATGGATGGCTGAGGGTCTTCTACAACCATCAAAGGCTAAAACAATGCAGAGGGTAGGTGAGGAATACCTGTGTGAGCTTTTGTCGAGGTCATTGCTAGAACGATCAACAAGTAATGATTCGTTCATTATCATGCATGACCTCATAAGCGACTTAGCACAATATGTTGGGGGCGAATTTTTTCATCTTTTTGAGGATGATAATGCTGGACGAATTTCGGAGAAAGTTCGCCATCTCTCCTTCTTGCAAGATAAGCTTGATGCACCAGACAAATTTGATGCTTTCTATGATCATTCACAGTTGAGAACCTTCATACCATTTAAGCTCTCAAACTCAAGGCAGTTTGGTTTATCAGCTGATGTAGTTTTCGGTAGCTTGATACCAAGATTCGTTTGTGCTCGGGTGCTTTCTTTGTCAGGTTACTCACTCATTACACTGCCTGATACAATTGGAAACTTGAAGCACTTGCGTTATTTGAATCTTTCTCACACAAATATTCAGCAATTACCGAAATCCATAGGGCTTTTGTACAATCTGCAAATATTGTTGCTTTCAAATTGTGTTCATCTCACTAGTTTGCCTGAAAGTCTGGTGAATTTGATTTACTTGCACCATCTTGATATCATCGGTGTCCCTTTGACAGAGATGCCCCCGCAATTTGGCAAATTGAAGCTTCTTCAAAATCTTGCTGTCTTTGTTGTCAACAGAAACACAGGATCAAGCATTAGCGAGTTAGGGGCTCTATTGCAACTTCATGGTTCACTTTCTATTGTGAACTTGCAGAACATTGCTGATGCCACAGATGCATTCAGAGCCAACTTGATGGGTAAGAAATTTCTTGATGAGTTAGTATTGAAATGGACAAATACTATCCATGACTTACACATTGAAGCAGCTGTTCTTGAAAATCTTCAGCCACATGGAAACTTGAAAAGGCTGAATTGA 2265 0.4208 MVVDVASALLSASLQVLIDRLASPQLLFFFRNKTYEAAEDLKLQLLSVNSVLVDAEEKQIVNPYVKIWLNELREALYSAEDLLDKLDTQVLEYKVRSQSHTTLDTVIDYFDSVSPFAKSLNRSLEKINLRLHVLRDYQNCLGLREVPQNLFPLLPNVPTTRRVDWARVYGRDSVKETIIQGMLGTMNEEVEPIVVAIVGMAGVGKTTLSQVLFSDEHVTRNFHIRSWVYVSEGSDVLYLTTKVYESLTGSSVGSTSLDRLQDQVASLLSGKNFLLVLDDFWAESFFDWELFKMAFMDAAIRCVILVTTRNENVAITMRAAVYFLSHLPDDDCWNIFAHYAFGNRNPEPTLLEIGHRIVRKCKGLPLAAKVLGSVLHSVTEAEEWNNILQSKMWDLPANKSNILAALRLSYQLLPSHLKACFAYCSIFPKGYEIKKLNLIHLWMAEGLLQPSKAKTMQRVGEEYLCELLSRSLLERSTSNDSFIIMHDLISDLAQYVGGEFFHLFEDDNAGRISEKVRHLSFLQDKLDAPDKFDAFYDHSQLRTFIPFKLSNSRQFGLSADVVFGSLIPRFVCARVLSLSGYSLITLPDTIGNLKHLRYLNLSHTNIQQLPKSIGLLYNLQILLLSNCVHLTSLPESLVNLIYLHHLDIIGVPLTEMPPQFGKLKLLQNLAVFVVNRNTGSSISELGALLQLHGSLSIVNLQNIADATDAFRANLMGKKFLDELVLKWTNTIHDLHIEAAVLENLQPHGNLKRLN* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1584 754 Coils Coil 69 89 - -
Amo13g1584 754 PANTHER DISEASE RESISTANCE PROTEIN RP 31 754 IPR044974 GO:0006952
Amo13g1584 754 Pfam NB-ARC domain 183 410 IPR002182 GO:0043531
Amo13g1584 754 PRINTS Disease resistance protein signature 194 209 - -
Amo13g1584 754 PRINTS Disease resistance protein signature 267 281 - -
Amo13g1584 754 PRINTS Disease resistance protein signature 361 375 - -
Amo13g1584 754 PRINTS Disease resistance protein signature 591 607 - -
Amo13g1584 754 SUPERFAMILY L domain-like 485 739 - -
Amo13g1584 754 PANTHER OS05G0414200 PROTEIN 31 754 - -
Amo13g1584 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 424 IPR027417 -
Amo13g1584 754 Pfam Rx N-terminal domain 10 99 IPR041118 -
Amo13g1584 754 ProSiteProfiles Leucine-rich repeat profile. 595 616 IPR001611 GO:0005515
Amo13g1584 754 Gene3D Ribonuclease Inhibitor 547 754 IPR032675 -
Amo13g1584 754 Gene3D - 409 495 IPR036388 -
Amo13g1584 754 Gene3D - 326 408 IPR042197 -
Amo13g1584 754 Gene3D - 29 130 - -
Amo13g1584 754 Coils Coil 38 58 - -
Amo13g1584 754 Gene3D - 156 324 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1584 Amo-Chr13 21406976 21409240 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1584 194 665 WRKY Transcription Factor Family AT5G45050 22.037 7.62e-09 57.4