Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1574 ATGGCCATGAGCAGGAGCAGGAGGTTACTGTCCGCTTTCCCTAGGGAGATGCTTAATGAGCTTGAAAATCCAAAATTCAAGGAATCTCTGTTGAAACATATGAAGATGGATGTTCCGCGGCAGTTGTTGCTGACCATCGTTGCTGTGGCCGATGACATGGAAGCGAATAGCTCTGCTACTGCCAGATCTACAAGCAGGGACGTGATGGAATGGTTCTGTCACTTCCAAGATATGATGTATCTTTTGGAGGAGGTTCTGCACAAGTTCAGATCCGGAGAAGCAGCAGGTGCAGATGCCAAACCCGAACTTGACCTCATCTTTCGGAGATTCGAAATCATAGCAAGACAGAAGCACCTTCTCTTCCAGACTGCGGAACAAGAAGAAGAACAAGGTGAGCAACCACAAACTTCACATCAGAAGCTAACACTTGACATTTATTGCAAAGAAAATGATGAGATGGTCCAATTTTTGCTGTCCGATGATCGAGCGAATGGTAGCACTGGCGTGTCTGTGATTGCCATCGTTGGCATGAACGGGACTGGAAAGACCAGACTTGCTGACCTTGTTTACCATGATGAACGAGTCAAGTCCTCTTTCAACCTCCGTGGTTGGATACAGTTTCCCAAAGAGCTTGATGCTGAGAGTTTGGCCAAGATAACTCTCGATAGTTTCAATGAAGATTTTCACTATGACGACAGTTTAACTGAACTGACACGTCGCCTAAACAAGTGCTTGCAGCGGCCCAAAAAGGTTCTTCTAGTGTTGGACGATGTTGAAGATCTTCCACATTGGGAAACCCTTCGGCCATGTTTTGCTGGTGCTGCCTGTGGAAGCGCGGTCATCCTCACCACATCAAGAGGGGATGTTGCCATCAAGATGCGTTCAGATTACGTCCTGTCGATTGAAGATTCGCCTTCTTTGTCTCTACAGCATGATTTCGGAGAACGTGAAAGCCTGGGACTGGCGAGAAAGTTTGAATCTGGAAAGCTATCTCTGGTTGCTGATGAAAATGAAGCAAGTAGTATCTTGTCCGACCCCTTTCTCACGCTGAATCCTTGGTCTCTTAACAACCTAGTTTCCCTGAAACTTACAGGGGCTCGGAAAAAAGATTTGCCAAATGGGATTGGAGAACTACGAAGGCTTGAACACATCGACCTCTCTTTCTCTGACATATGCACGCTGCCTGATTCAATTAGCGCCTTGTCTCATTTGCAAACTTTGAAGTTGTCTTTCTGCTGCTATCTCCATCGGCTGCCAAGTACTCTGGCGAATTTGGTTGGATTGCGTAAACTGGATCTCAGGGGCACCAAGCTGGAAGACATGTCCTTAAAGCTGGCAAGTTTGAGAAATCTTGAAACACTACATGGCTTCAGCGTGAATTCAGGGTCGAATTTGGCAGAGTTGGCTAATGCTTCAAACATTCAGACACTGAGCATCACAGACTTGCAGAACATTGCCGATGCTAATAGTGCCTCCAAAGCTAGATTGAAAGAAAAGAGTCGTCTAGAAAGTCTTACATTGAGATGGAATCAACTGCGCTTTGCGGGTTGTGGAGAAGCGCTAGAATATTTGCAGCCGCCGACACAGCTAAAAATGCTCAACATATTGGGCTGTCCTGAAAGAAGTTTTCCTGGTTGGTTAGGAGATGTATCATTCTGGACTTTAGGGACCCTACACATTCGTGACTGTAGAAATTGGCCTTACTTGCCACCACTTGGACAACTTCCATCTCTTGAAGAGCTCTATATTCAAGGTTGTGACAGCGTGAGATCAATAGGCAATGAATTCTATGGTGAGACCAATTCACATGTCCCGTTTCAGTCTTTGCGGATCCTGTGGTTTGTCGACATGCCCAACTGGAAAGAGTGGATTCTCTTAGATGATCAAAGCCCTCAATTTCCATGCCTTCGTGAGCTTTATGTGATGCATTGCCCGGAGCTGCTGCATGACTTGCCCAGACACCTTCCTTCACTTAAGATTAAGATATCTCGATGTGATCGCCTTGAGACTCCACACCCAAAGATAGTTGATGACCATGAGTTGATGGGTGGAGAACAACACTGCACTGAGATTCTCACAAGTGTGGCTGAAGTGACTCCCGAATCCTCCTCACACCATGCCCCGGAAGTTCAAGAGGGAGGAACAACCATAATGTCCCCTGTTGTTACCAATAGTAAGGTTGACAGAGATATGCTTGACTTTAGGTCTTCATTAGACATTGTGGAAGTTTCAGATGCATCAGAACTGTGCAATCTGCCATGTGGATTAAAAAGCCTTAGAATTGAAGGCTGCCAGAATCTTGATTTGCTAGCAGATGGAGTTTTTGGTTCAGATATTTTTGAGTTGTTTCTTACCGATTGTTTTTCTGGCAGGCGCTTTGCTGATGCTCTGCACCCCAATTCCCTGAGAACACTTTATATCCACAAATGTCCAAATCTGGAGTTCCTTAACCCTCTTGGAGAACACAATAATAAGTTTGAACTCTTAGAATATCTTTGCATAAGCAGTAGTTGCAAATCTCTGGTATCCATCTCCATAAATCTTTTCCCAAGACTCCAAACTCTATACATCAAGGGTTGTCCCAATCTCAAGTTGTTGTCGATGGTTGAGGGGTTTCATGATCAGAATCTGAAACTTGAGTCCTTGGGAATCCTGGACTGCCCTAACCTGGTATCCTTTCCAGAGAGAGGATTGCCTGCTCCCAATCTTAAATCAGTAACAATATCTAATTGCACAAGTTTGAATTCATTGCCCAGTAATCTAGCAACTCTTACATCACTTCGGTCATTGCTTATAGACACATGTCCAAAACTTGAGTCTCTTCCTGATGGGGGCGTGCCGTCCAGTTTAAGTTTACTTTCAATTTCATTTTCTGACAAGCTTGTACCTCAAAAGGAGTGGAATCTGCATAGGCTTCCCTCTCTAACTCATTTAGAGATTGAAGGTGGATGCATTGGCATGAAGTCATTTCCAGATAAGGATCTTCTTCCAAGAAGTCTCAAGTCTCTACGCATCAGTAGGCTCTCAGATCTCAGAGTCATGAATGGCATTCAGAACTTGATCGCCCTTGAGAAATTGGAGATTAATGGTTGCCATGGGCTTTATTCCTTGCCAGAAGGGTTGCCGTCATCCTTGAATTGTCTTTGCATCAAAGAATGTTCAATATTGACCCAGAAACTCTTCTACAAAACAGCGTCTGAGTGGAGCAAGATAGCCCATATTCCCAACCTACAAATTGATGATTGA 3246 0.4461 MAMSRSRRLLSAFPREMLNELENPKFKESLLKHMKMDVPRQLLLTIVAVADDMEANSSATARSTSRDVMEWFCHFQDMMYLLEEVLHKFRSGEAAGADAKPELDLIFRRFEIIARQKHLLFQTAEQEEEQGEQPQTSHQKLTLDIYCKENDEMVQFLLSDDRANGSTGVSVIAIVGMNGTGKTRLADLVYHDERVKSSFNLRGWIQFPKELDAESLAKITLDSFNEDFHYDDSLTELTRRLNKCLQRPKKVLLVLDDVEDLPHWETLRPCFAGAACGSAVILTTSRGDVAIKMRSDYVLSIEDSPSLSLQHDFGERESLGLARKFESGKLSLVADENEASSILSDPFLTLNPWSLNNLVSLKLTGARKKDLPNGIGELRRLEHIDLSFSDICTLPDSISALSHLQTLKLSFCCYLHRLPSTLANLVGLRKLDLRGTKLEDMSLKLASLRNLETLHGFSVNSGSNLAELANASNIQTLSITDLQNIADANSASKARLKEKSRLESLTLRWNQLRFAGCGEALEYLQPPTQLKMLNILGCPERSFPGWLGDVSFWTLGTLHIRDCRNWPYLPPLGQLPSLEELYIQGCDSVRSIGNEFYGETNSHVPFQSLRILWFVDMPNWKEWILLDDQSPQFPCLRELYVMHCPELLHDLPRHLPSLKIKISRCDRLETPHPKIVDDHELMGGEQHCTEILTSVAEVTPESSSHHAPEVQEGGTTIMSPVVTNSKVDRDMLDFRSSLDIVEVSDASELCNLPCGLKSLRIEGCQNLDLLADGVFGSDIFELFLTDCFSGRRFADALHPNSLRTLYIHKCPNLEFLNPLGEHNNKFELLEYLCISSSCKSLVSISINLFPRLQTLYIKGCPNLKLLSMVEGFHDQNLKLESLGILDCPNLVSFPERGLPAPNLKSVTISNCTSLNSLPSNLATLTSLRSLLIDTCPKLESLPDGGVPSSLSLLSISFSDKLVPQKEWNLHRLPSLTHLEIEGGCIGMKSFPDKDLLPRSLKSLRISRLSDLRVMNGIQNLIALEKLEINGCHGLYSLPEGLPSSLNCLCIKECSILTQKLFYKTASEWSKIAHIPNLQIDD* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1574 1081 Pfam NB-ARC domain 164 295 IPR002182 GO:0043531
Amo13g1574 1081 Gene3D Ribonuclease Inhibitor 339 677 IPR032675 -
Amo13g1574 1081 Gene3D Ribonuclease Inhibitor 949 1071 IPR032675 -
Amo13g1574 1081 Gene3D Ribonuclease Inhibitor 789 948 IPR032675 -
Amo13g1574 1081 Gene3D - 128 299 IPR027417 -
Amo13g1574 1081 SUPERFAMILY L domain-like 352 660 - -
Amo13g1574 1081 PANTHER OS05G0414200 PROTEIN 369 817 - -
Amo13g1574 1081 PANTHER OS05G0414200 PROTEIN 34 314 - -
Amo13g1574 1081 PANTHER DISEASE RESISTANCE PROTEIN RP 34 314 IPR044974 GO:0006952
Amo13g1574 1081 PANTHER DISEASE RESISTANCE PROTEIN RP 369 817 IPR044974 GO:0006952
Amo13g1574 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 303 IPR027417 -
Amo13g1574 1081 SUPERFAMILY L domain-like 738 1059 - -
Amo13g1574 1081 PRINTS Disease resistance protein signature 171 186 - -
Amo13g1574 1081 PRINTS Disease resistance protein signature 245 259 - -
Amo13g1574 1081 PRINTS Disease resistance protein signature 399 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1574 Amo-Chr13 21280432 21286670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1574 357 454 WRKY Transcription Factor Family AT4G12020 35.354 8.83e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1574 - - ahf:112737366 2103.18