Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1572 ATGGTGGCCTTCCTGTTGAGTGCATTCGTTCAAGCACTCTTGCAAGTCTTGCTGGACAGGTTGGCTTCTCGTCAAATTCTGAAACTGTTTCGTCAGAAAATTTCAGCAGCAAATGAAGCACAAGCAGCAGCCGAGAAGCTGAAATTCCAACTGCTATCGGTGAATACAGTACTTGATGATGCAGAGGAGAAGCAGATCGTCAATCCATATGTCAAGATATGGCTTGATGAGCTTCGAGAAGTTATCTACAAGGCGCAGGACGTTCTAGACCAAATTGCTCTTGAAGTTGACCGATCATACAAGGCCATGGACAGGGTAAGAGAATTCTTGCATATTACCAATAAGTTGACTTCTAGTCTTGTTGAGATAAACAGTAGAATACAAATTTTAAGGGATCAAAAAGATTGCTTAGGCCTCAAAGAACAACTAGAAAAGCGATCTAGCCTGTATTCAAGTGGTACTGATCTATTGTATGTACCGACAACCCGTATAGTAGATGAGTCCAAGGTATTTGGCAGAGATAATGACAAAAAGCAAATCATTCAAAAAATGAAAGATGCGATGGAGCAGAAAGTGGAACCTGTATGTGTTGTTGCAATTGTTGGGATGGCAGGGGTCGGAAAGACCACTTTGTCTCAGCTCTTGTTCAACGATGGTGGGGTGGTGCAGATGTTCGACACGCTGTCTTGGGTTCAAGTTTCGGGGGAATCCGATGTGGTCCACTTAACCAAGAAGGTTTGCGGGTCAGTAAGTGAGAGCTTGGACGCGCTTCAAGTCCAGCTAAATGAGAAGCTGAAAACACAGAGGATGTTGCTTGTTTTAGATGATTTTTGGTCCTTGAACTCTTTTGATTGGGACCTTTTCAAAATGGTATTTGCCAATGCAATGCCTGGAAGTGTTATTCTTGCCACCATGCGCAATAAAAATGTTGCAGATACCATGCATGCTGCTGTCACTTATCCACTTTCCCCACTATATAAGAATTGCTGGGACATCTTTGCCTACTATGCTTTTGGAAACAGAAGCCCTGAACCTGATACATCTGATCCAGCTTTGGTGGAGATTGGCAAAAGAATAGCAACAAAATGCAAAGGTCTTCCTTTAGCAGCAAAAGTTCTGGGGAGTCTTTTACGTTCAGTGACTGATGTTGGAGAATGGAACAACATACTGCAAAGTAAAATGTGGGATCTGCCAGCTAACAAGAGCAACATATTACCTGCATTGAGATTGAGCTATCAGCTTCTCCCTTCGTATTTGAAGGCCTGCTTTGCTTATTGTTCTCTGTTTCCAAAGGGATATGATATTGATAAGCAGAACCTAATCCATTTATGGATGGCTGAGGGTTTTCTGCAACCATCAAAGACTAAAACGATGCACAGAGTTGGTGAGGAATACTTGCAGGAACTGTTGTCAAGGTCACTACTACAACGATCAACCAAGAGTGAGTCATGTGTTGCAATGCATGACCTCATAAGTGACTTAGCACAATACGTGGGGGGCGAGTTTTTCCACTCCATTGAGGAAGGTAACTTTCAGATGATCCCAGAGAAAGTTCGTCACCTGTCATTCTCAAAAGGTCTGCCTGATAAACCTCCAAATTATTTTTCACAGTTAAGAACCTTTCTATCATTTAGAGAGGCAAACTCTAGTGCATCTGGTGCATTAACTAATCAATTTTTTTATGGATTGATACCAACATTTGAGCGTGTTCGTGTTCTTTCTTTGCCTGATTATCCAATTTCTACGTTGCATAGTATTGGGCACATGAAACATTTGCGGTATCTGAATCTTTCTGGCACAATGATTGAAGAATTACCAGAATTCGCAAGTTCCTTGTATCATCTACAAATCCTGCTGCTATCAAACTGTGTTTATCTCAAAAGTTTGCCCAAAGATATGGAGAATTTGACTGATTTACTCCAGCTTGATGTTACCGGTGCTCCCTTAAAAGAAATGCCACCAAATTTTGGTAGATTGAAGCTTCTTCGGCATCTTACTACCTTTGTTGTGAGCGAAAGCGCAAGATCAAGCATTACTGAGTTGGGAGCTCTATCTCAACTTCATGGTTCACTTTCAATTGTGAATCTACAGTATGTCAATGATGGCAAGGATGCACTAGGGGCCAACTTGATTGAGAAGACATTTCTTGACGAGCTGGTGTTAAAATGGACCAAGACTATCCATGATGTAGAAAATGAAGCAATCACTCTTTACAACCTGAAGCCATGCACAAATCTGAAGAAGCTTGAGATAGAAAACTATGGTGGTAACACATTCCCAGATTGGTTAGGCAACCCTTCATTCTCTAACTTGGTGTCTGTAAAACTCATTCATTGCAGCTTCTGCTTGAGTTTGCCACCACTTGGGCAATTATCCTCCATGAAGACACTCCTGATAGAAAAAATGACATGGCTAGAAACCGTGGATTTTGAATTCTATGGAAATAGAAATTCACCCTTCAGGTCCCTTGAAACTTTGACGTTTAAGAACATGCCTAGTTGGAAGAAGTGGCTGCCATCAGATGATGTTCAAGAGCACTTCCCTTCTCTTAAAGAGCTTCACATTTTGAGTTGTCCTAAATTTGCTGGGAACTTACCCCAACATTTGGGTTCTTTGGAAAAACTAGTCATTGTTGACTGTAGCATTGTTACCGACTCACTTCCAAGGGTTCCATTGTTGAAAGAACTGGAGCTAACTAATTGTAATTCATTGGTTTCCCTGCCTGAAGAAATGATGTGGGGGAACCAACAAATGACCAAGGTGACTATATGCAATTGTCAGTTGCTTCAATCTCTGCGTACTCTTGAACATGTCGGAAGGTTAGAGTTACTTCACATCAACGAGTGTAGGGAATTAGTTCTTTTTTCATCACTGCATGACTTGCACCGTTATCAAGCAATTGAGGCTTTGCACTTGAAAGACAGTTGTCACACGCTGCAAGTGTTTCTCTTATCTTCTTTTGGGGCCCTTCAGGATCTCCATATACAAGGCTGTCCTAATCTTCAATCTCTTGAGATATCAAGCGATTCTACTGAGAATTTGTCGCACCTTAAGAAGGTGCAGCTAAAGGACTGCCCCAAGCTAGTGTCTTTCCCGAGTGGAGGGTTTCCTACTAATCTTCAAGAGTTATCAATTTGCAACTGTGACGAATTGTTGCCCGAAGCAGGGTCTAGTCTTCGTCAAATGACATCGCTTGCGTACTTGGAGATTAAGGGGAAGTTGATTGGTTTAGATTCATTTCCAGATGGAGGACTGCTTCCATCTTGCTTAACTGATCTTCATATCATAGGATTTGAAGATCTCAAGTCTCTGAGTCATGCTGGTCTTCAACACCTTGTCTCTCTCAAAAGTCTGATGATTGAAAGTTGCAAGAAGCTAGACTCTCTACCTGCGGAGGGGCTTCCAGCTTCCTTATCAAAACTTGATATTGTGGATTGTCCATTGCTTGCTCCTCTCTGTCAGCCTACAGGAAGCTATTGGTCCCTCATTTCCCATATCCGCGACAGAAACATTGTGCGAAGAAATGATATCTAG 3534 0.4191 MVAFLLSAFVQALLQVLLDRLASRQILKLFRQKISAANEAQAAAEKLKFQLLSVNTVLDDAEEKQIVNPYVKIWLDELREVIYKAQDVLDQIALEVDRSYKAMDRVREFLHITNKLTSSLVEINSRIQILRDQKDCLGLKEQLEKRSSLYSSGTDLLYVPTTRIVDESKVFGRDNDKKQIIQKMKDAMEQKVEPVCVVAIVGMAGVGKTTLSQLLFNDGGVVQMFDTLSWVQVSGESDVVHLTKKVCGSVSESLDALQVQLNEKLKTQRMLLVLDDFWSLNSFDWDLFKMVFANAMPGSVILATMRNKNVADTMHAAVTYPLSPLYKNCWDIFAYYAFGNRSPEPDTSDPALVEIGKRIATKCKGLPLAAKVLGSLLRSVTDVGEWNNILQSKMWDLPANKSNILPALRLSYQLLPSYLKACFAYCSLFPKGYDIDKQNLIHLWMAEGFLQPSKTKTMHRVGEEYLQELLSRSLLQRSTKSESCVAMHDLISDLAQYVGGEFFHSIEEGNFQMIPEKVRHLSFSKGLPDKPPNYFSQLRTFLSFREANSSASGALTNQFFYGLIPTFERVRVLSLPDYPISTLHSIGHMKHLRYLNLSGTMIEELPEFASSLYHLQILLLSNCVYLKSLPKDMENLTDLLQLDVTGAPLKEMPPNFGRLKLLRHLTTFVVSESARSSITELGALSQLHGSLSIVNLQYVNDGKDALGANLIEKTFLDELVLKWTKTIHDVENEAITLYNLKPCTNLKKLEIENYGGNTFPDWLGNPSFSNLVSVKLIHCSFCLSLPPLGQLSSMKTLLIEKMTWLETVDFEFYGNRNSPFRSLETLTFKNMPSWKKWLPSDDVQEHFPSLKELHILSCPKFAGNLPQHLGSLEKLVIVDCSIVTDSLPRVPLLKELELTNCNSLVSLPEEMMWGNQQMTKVTICNCQLLQSLRTLEHVGRLELLHINECRELVLFSSLHDLHRYQAIEALHLKDSCHTLQVFLLSSFGALQDLHIQGCPNLQSLEISSDSTENLSHLKKVQLKDCPKLVSFPSGGFPTNLQELSICNCDELLPEAGSSLRQMTSLAYLEIKGKLIGLDSFPDGGLLPSCLTDLHIIGFEDLKSLSHAGLQHLVSLKSLMIESCKKLDSLPAEGLPASLSKLDIVDCPLLAPLCQPTGSYWSLISHIRDRNIVRRNDI* 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1572 1177 Gene3D - 157 320 IPR027417 -
Amo13g1572 1177 CDD RX-CC_like 46 133 IPR038005 -
Amo13g1572 1177 PANTHER OS05G0414200 PROTEIN 33 933 - -
Amo13g1572 1177 SUPERFAMILY L domain-like 487 881 - -
Amo13g1572 1177 PRINTS Disease resistance protein signature 197 212 - -
Amo13g1572 1177 PRINTS Disease resistance protein signature 264 278 - -
Amo13g1572 1177 PRINTS Disease resistance protein signature 363 377 - -
Amo13g1572 1177 PRINTS Disease resistance protein signature 888 904 - -
Amo13g1572 1177 Pfam Rx N-terminal domain 9 99 IPR041118 -
Amo13g1572 1177 Gene3D - 411 497 IPR036388 -
Amo13g1572 1177 Gene3D - 14 129 - -
Amo13g1572 1177 ProSiteProfiles Leucine-rich repeat profile. 591 612 IPR001611 GO:0005515
Amo13g1572 1177 PANTHER DISEASE RESISTANCE PROTEIN RP 33 933 IPR044974 GO:0006952
Amo13g1572 1177 Gene3D Ribonuclease Inhibitor 537 911 IPR032675 -
Amo13g1572 1177 SUPERFAMILY L domain-like 887 1160 - -
Amo13g1572 1177 Pfam NB-ARC domain 179 412 IPR002182 GO:0043531
Amo13g1572 1177 Gene3D Ribonuclease Inhibitor 974 1158 IPR032675 -
Amo13g1572 1177 Gene3D - 326 410 IPR042197 -
Amo13g1572 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 426 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1572 Amo-Chr13 21257899 21261432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1572 181 808 WRKY Transcription Factor Family AT5G45050 23.249 1.30e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1572 - - ahf:112732721 2297.7