Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1562 ATGTCAATGATGGAATTAGTGTTAGAAGAACAGAATATTGAAGATGTGCCCAAGGTTGGCATGTGTTTTGGAACCATTGAAGATGCAAATCAATTTTATCAGAATTATGCCAAGCTCGTTGGTTTTGTTACTAAGATAAGGTTTACCCGAAGAGTTGGTAAAGATAAGGTTTCTAAGAATCAAATGATCACTTGCAATAGGGAGGGGAAACGCAAGTCTAGAGTTTTCCCAATAGAAAAGACCAACCTTAGAACCAACTACAATTTCCTCGCAAGGATTTCTATTAGGTTGAATAAGGAAGGTCTTTGGATTATATCGAAGGTGTGTTTGGATCATTCACATCCTTGTGATCCAGAGATGGCAAAACTGTTGACATGTAATAGAGTGATGACTATGCACATGTGTCGAGTCATTGAGAGGAATAATGAAGCAGGTGTGAGACCAAGCAAAACATATCAAGTATTGGTGGGTGAAGCGGGGGGTTTCTCTAAGATAAACTTAATGGAAAAAGATGTTAGGAACTATCTCAGCAGAAAGGTGTGCAATGTTACGGAAGAAATGGGTGCATACCCGAGATTCTAG 582 0.39 MSMMELVLEEQNIEDVPKVGMCFGTIEDANQFYQNYAKLVGFVTKIRFTRRVGKDKVSKNQMITCNREGKRKSRVFPIEKTNLRTNYNFLARISIRLNKEGLWIISKVCLDHSHPCDPEMAKLLTCNRVMTMHMCRVIERNNEAGVRPSKTYQVLVGEAGGFSKINLMEKDVRNYLSRKVCNVTEEMGAYPRF* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1562 193 Pfam FAR1 DNA-binding domain 31 117 IPR004330 -
Amo13g1562 193 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1562 Amo-Chr13 21136957 21139342 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g1562 FAR1 2.4e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1562 - - adu:107485253 338.576