Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1550 ATGGCAGTTGTATTGACCCAATGTTCAGAAAAGTTAGGCTACCTCGTACTTCAATTAGGCAAAAATTTTGTTATGTTTATGGTGATGGTGATTGTATGCAATGCTTTACATTATTTTCTAAAGCCTTATTCACAACCTCGGATCACTTCTGACATATTTGTAGGACTAGTGATGGGGAATGTATCTTTCTTACGCAAATTGTACATGGAATTCAACACAACCTTTGTGTTCATCATAGATTTTGGTATGATGTGTTACATGTTTGCTTTGGGGATAGAAATGGATCCATTCATACTGTTCAAGAAACCAAGTAAGGATGCTCAAGTTGCATATGCAGGAATAATTTGCACTTTCATCATAGCAGGCACCACAACACCATTCCTGCATTACTTTACAGATCAAACCAAGTTGCTAGAATACACATTCTCCCTCTCAACTCTTCTATCTAGCACAGCATCCCCAGTTTTGACTCGTTTGATAACGCGACTCAAGATAGGCAAGTCGGATATTGGGAAGCTTGTGATAGCAACAGGGATGCACTCGGATTTTGTATGCTCCTTGCTTCTTTCGGTTGGCTACATAGCCATGCCATTGGACGCATTTTGCGATGATTATGACGAAAAGAAGCGCCTTAAGAAGGCCATCATAATGGGGTGTGCACTTCTTGGACAGACTGTTTTGACAGCATTGGTTTCACCAATCTTTATGAACTGGGTTGATAATGAAAACCCGGAAGGGAAACCTATGAAAGGTTCACATTTGGTGTTGTCAATTGCAGTTATGGTCATGGCTTGTGCCTCATCAACTATATATGAATATAGTCCAATTCTAAGTGCTTTCATGGCAGGGGTGTGTTTTCCAAGGGAAGGCAGAGTTTCCAAATGGGTTATTGCCAAAATCAACTACTTGTTGACCACTATCTTCTTTCCTATCTTTTTCTTGTGGATGGGTTATGCAGCTGATTTCAGAGAGTTTGAAGCTGGACATCTATTGACTTGGGCAAAATTGTTTACACTTATTCTCATTGCCATTGTCGGCAAGGTTGTTGGAACAGTTATTTTGGGGATGATACTTGGTTTTCGCTGGCCGGAATCGGTTGCAATTGGATTACTCCTAACCACCAAGGGCCATTTTCACATCTTCTTGGCTATCAAAATAGGTTGTGGTGCCAATACTTCAACTGGCATTACAATGATAATGGCAATATTTTTCACAATAGTGCATACTCCATCAGTGATAGCATACATCATAAAACGTGCCAGGAAACGAGCACCAAATCATCGCATGACGCTCCAGTTGCTTGACCCACTACATGAGCTAAGGATACTCTTGTGTGTCCACGGACCTGACAACGTTCCTGCTTCCATCAACTTCATGGAGATCTCAAGAGGGGCAACACCCCCCGGCATTGTGGTATATGTCGCGGACATGATTGAACTCACTGATCAGATAGCAGCAACAGTAGAGAGAGGCACAGAAGGACATACAACAACTGTGAAAGATGCTGCAGTCGTGGAAATGAGGGACAAAGTATCCAACTCTTTTCAAGCCTATGTAGATGAGGATAGTGAAGGTATTACTCTCAAAAGAACATTAGCAGTGTCAACAATCACTAACATGGCACAAGACATCTGTGTCTTAGCAGATGAATTGATGATTGCCCTCATTATACTACCATTCCACAGGAACCAACGTCAGGATGGAAAATTGGATATGGGTCACCAGGGATTCAGATATGTGAACAGAAAGTTATTAAGGAGTGCTCCTTGTTCCGTGGGGATTCTAGTTAACAGAGGCCTTGGATCAATTGAAAAGATATCAAGAACTCAGGTATCACTGAATGTGGCAGTAATATTCATTGGCGGAAAAGATGATAGGGAAGCACTTGCCTATGCAGGTATGGTAGCACGACATCCAGGAGTAAAACTTACAGTGATCAGATTTCTGGTAGATTCCAGTGCAGAATCCTCAAGATTAGCAGCTTATAGAGTCAACCTTCCAGAGCTGGAGGAAGAAGTGGGACACGACGACGAATGTTTTGCACAATTCTACGAAAAGCATATAAATGGGGGTTGTATTTCCTACTTAGAGAAGCATCTTGCCAGCGCAGCCGAAACATTCACAACTCTCAGATCATTTGAAGGGCAATACTCTTTAGTCATCGTAGGTAAAGAAGGTGGGATGAACTCTATATTGACAAAAGGGATGGACGATTGGCAACAGTGCCCAGAATTGGGACCAATCGGGGATGTACTTTCAGGACCAGATTTCGCAATGACAGTGTCTGTGTTGGTAATCCAACAACATAGACTCAAAGGAGAACTAGATGGTCTTGATGAGGACTTCTCCATCATGTAG 2358 0.4207 MAVVLTQCSEKLGYLVLQLGKNFVMFMVMVIVCNALHYFLKPYSQPRITSDIFVGLVMGNVSFLRKLYMEFNTTFVFIIDFGMMCYMFALGIEMDPFILFKKPSKDAQVAYAGIICTFIIAGTTTPFLHYFTDQTKLLEYTFSLSTLLSSTASPVLTRLITRLKIGKSDIGKLVIATGMHSDFVCSLLLSVGYIAMPLDAFCDDYDEKKRLKKAIIMGCALLGQTVLTALVSPIFMNWVDNENPEGKPMKGSHLVLSIAVMVMACASSTIYEYSPILSAFMAGVCFPREGRVSKWVIAKINYLLTTIFFPIFFLWMGYAADFREFEAGHLLTWAKLFTLILIAIVGKVVGTVILGMILGFRWPESVAIGLLLTTKGHFHIFLAIKIGCGANTSTGITMIMAIFFTIVHTPSVIAYIIKRARKRAPNHRMTLQLLDPLHELRILLCVHGPDNVPASINFMEISRGATPPGIVVYVADMIELTDQIAATVERGTEGHTTTVKDAAVVEMRDKVSNSFQAYVDEDSEGITLKRTLAVSTITNMAQDICVLADELMIALIILPFHRNQRQDGKLDMGHQGFRYVNRKLLRSAPCSVGILVNRGLGSIEKISRTQVSLNVAVIFIGGKDDREALAYAGMVARHPGVKLTVIRFLVDSSAESSRLAAYRVNLPELEEEVGHDDECFAQFYEKHINGGCISYLEKHLASAAETFTTLRSFEGQYSLVIVGKEGGMNSILTKGMDDWQQCPELGPIGDVLSGPDFAMTVSVLVIQQHRLKGELDGLDEDFSIM* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1550 785 PANTHER CATION/H+ EXCHANGER 3 4 783 - -
Amo13g1550 785 PANTHER CATION/H + ANTIPORTER 4 783 - -
Amo13g1550 785 Pfam Sodium/hydrogen exchanger family 28 412 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo13g1550 785 Gene3D - 21 426 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1550 Amo-Chr13 21032341 21035688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1550 24 785 Antiporter Super Family AT3G52080 49.680 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1550 - - gmx:100815945 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1550 13 21032341 21035688 Amo18g2909 18 124106721 124112376 PCT
Amo13g1550 13 21032341 21035688 Amo08g1676 08 27807536 27810517 PCT