Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1493 ATGACCAACCAAAACATTGATTGGATTGGTTCATTTGTGTCTGCGGCAATGCAAGTGGCGTTGGGACGTGTAGACACTATAGTTTCTCCTGCTGTTCTAGAATTCCTCCGAGGCAACCACATTGACGAGCCACTCCTGGAGAAGTTGAAGATGCTGTTGGTGTTAGCTGCCACAGTGCTCAATGATGTTGAGGAAAAGCAGTTCACTGATACATCCGTCAAGGAATGGTTTGATGGGCTGAGGAATGCTGCCTATGATGCTGATGATCTCCTGGATGAGATTGCCACTCTTCAAAACAAGGAGGATTCTTCTGGATCTGACACCGTCGTTGGCCGGTTTAATGCTTATCTTCATTCTCTAACTCCATCTGCTCGACAACTGACTTCTAATCTCGACAAGATAGTTGAGATGCTGAAATTTTTTACTGAGCATAAGGGCAGTCTTGGCCTCAATGAAGTCAACGCTGGTAAGTCACTCTCGTTGGCTTTACCCACAACTTCTTTGGTGGATGAACATCAAGTGTACGGCAGAGATGATGACAAGAAAAAGATTATTGACTTTCTGCCATCTAATGGAAAAAGGGTGGCTGTTGTTGCAATTGTTGGGATGGGAGGGGTTGGTAAAACCACTCTTGCTAGGATGTTGTACAACGACAATCTTTACCAGTTCAGATCATGGACTTGTATTTCAGAGACATCAGACGTTTGTCAAGTTACCAAGAAAGTCTATGAGTCATTCACTTTGTCTCATTCTAACATTTCAGACTTGAATGTACTCCAAATCAAGCTTGAGAGGCTATTAAGAGGACAGCGGTTTCTGCTTGTTTTGGACGGGTTTTCGGATGAAAACTCTCTCGATTGGGACACGCTGAGAAGGCCATTCCTCTCAGGAGGCAGGGGAAGTAAAATCATCGTAACAACACGCAGTCAAAGAATTGCAAAAGCAGTTCAAGCTGATTTAACTCATCCCCTCGTGCCTCTCCAAGAAGAAGATACATGGAACTTATTCTCAAGTCATGCATTCAAAGCTGGAAAACCTATCAACTACCATGTCATAGAAGCAATTGGTAAGGAAATAGTGAAGAAGTGCAAAGGCCTTCCTTTAGCTGCAAAATCACTAGGGAGCCTTTTGCATTACACGGAGGATGTTGAGGAGTGGGAAAATGTATGCAACAGCCATATATGGGAGTTACCATGTGGTAAGAGCAGCATACTTCCTGCTTTAAGATTGAGCTACAATCATCTACCTTCGCTGTTAAGGCAATGCTTTGTTTACTGTTCCATATTTCCTCAAGGATATGAAATTGAAAAGTGGGACTTGATTTACTTATGGATGGCTGAAGGTATTCTGCCGAAACCAGACACACAGAAGCGAGTAGAAGATGTCGGCCATGAATGCTTTCAGGAACTATTGTCCAGATCTTTTTTTGATCAGTCAAATCCGAAGTGA 1449 0.4313 MTNQNIDWIGSFVSAAMQVALGRVDTIVSPAVLEFLRGNHIDEPLLEKLKMLLVLAATVLNDVEEKQFTDTSVKEWFDGLRNAAYDADDLLDEIATLQNKEDSSGSDTVVGRFNAYLHSLTPSARQLTSNLDKIVEMLKFFTEHKGSLGLNEVNAGKSLSLALPTTSLVDEHQVYGRDDDKKKIIDFLPSNGKRVAVVAIVGMGGVGKTTLARMLYNDNLYQFRSWTCISETSDVCQVTKKVYESFTLSHSNISDLNVLQIKLERLLRGQRFLLVLDGFSDENSLDWDTLRRPFLSGGRGSKIIVTTRSQRIAKAVQADLTHPLVPLQEEDTWNLFSSHAFKAGKPINYHVIEAIGKEIVKKCKGLPLAAKSLGSLLHYTEDVEEWENVCNSHIWELPCGKSSILPALRLSYNHLPSLLRQCFVYCSIFPQGYEIEKWDLIYLWMAEGILPKPDTQKRVEDVGHECFQELLSRSFFDQSNPK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1493 482 Gene3D - 156 321 IPR027417 -
Amo13g1493 482 PRINTS Disease resistance protein signature 197 212 - -
Amo13g1493 482 PRINTS Disease resistance protein signature 266 280 - -
Amo13g1493 482 PRINTS Disease resistance protein signature 363 377 - -
Amo13g1493 482 Pfam NB-ARC domain 178 392 IPR002182 GO:0043531
Amo13g1493 482 PANTHER DISEASE RESISTANCE PROTEIN RP 51 479 IPR044974 GO:0006952
Amo13g1493 482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 426 IPR027417 -
Amo13g1493 482 Gene3D - 326 416 IPR042197 -
Amo13g1493 482 Coils Coil 80 100 - -
Amo13g1493 482 PANTHER - 51 479 - -
Amo13g1493 482 Coils Coil 482 482 - -
Amo13g1493 482 Pfam Rx N-terminal domain 46 106 IPR041118 -
Amo13g1493 482 Gene3D - 16 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1493 Amo-Chr13 20130553 20132001 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1493 174 436 WRKY Transcription Factor Family AT5G45050 24.549 7.94e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1493 - - aip:107632529 959.518