Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1484 ATGAACATAATAATGYGCAGAACAAGTTGTTCTGTTTTTCTATCCCTTCTCGTTCTATCATCTTTTGTGGCAGAAATTCATGGTAGCAACAACAAGCAAGTTCAAGCACTTAACAATCTTCATAAGTCCAAGTTTAGAGCAAGATCATCATCATCATCGTCATCATCAGATGTTACACATAAGAGTGAATTTGAGGTTGAAGAGCTTCATAACTATGATGATGTCATTGATTCTCAAGAAGGACTTAAAGAGAAAGACAGGATTTTGAGGCTTCCAGGGCAACCCCAAGTGAAGTTTTCTCAGTATGGAGGCTATGTTACAGTTGACAAATCCAATGGCCGTGCCTTTTATTACTACTTTGTTGAAGCTCAAAATTCTAAGGATACATTGCCTCTTCTTCTTTGGCTCAATGGAGGTCCAGGGTGTTCATCTCTTGCCTATGGAGCAATGCAAGAACTTGGACCCTTCAGAGTAAATAGTGATGGCAAAACACTCTACAAAAATAGATATTCATGGAACTATGCTGCAAATGTTTTGTTCCTGGAATCACCTACTGGGGTAGGATTTTCTTACTCAAACACAACATCAGATTACAAGACAAATGGGGATAAGAAAACAGCAGCAGATAATTATTTGTTCTTGGTGAATTGGTTGGAAAGATTTCCTGAATACAAGAATAGAGAATTCTATATTTCTGGAGAGAGTTATGCTGGACATTATGTTCCTCAACTTGCACACACTATCCTTTACCATAATAAAAGGGCAAAAAGGACAATCATCAACCTCAAAGGAATATTGATTGGGAATGCAGTGATTAATGATGACACTGACAACAAAGGAATGTATGATTTTCTTGCTACCCATGCAATCATCTCAGACCAAACAGCATCTGATATTGAAAAATTTTGTGATTTCTCATCCTCAAAGACTACAAGTGAGTGTGATGATGCCTCTTATGAAGCTGACAAGAATATTTACTACATTGATTTATACAACATTTATGCTCCTGACTGCAAGAATAACAATCTCACTGCTTATCCCAAGAAACCTTCTATTGTGACTGATCCATGTAGTGAGAGTTATGTACATGCATATATGAATAGGGAAGATGTTCAAGAAGCACTCCATGCAAATGTCACTAAGCTCGTATATGATTGGGAYCTATGCAGTAATGTCATTGGAAGATGGGGTGATAGCTCCACAACAGTCCTTCCCCTTTTACATGAATTCCTCAATAATAACCTTAGAGTTTGGATTTTCAGTGGTGACATAGATGGAAGGGTGCCAGTGACTTCAACCAAGTATTCCATTAAGAAGATGAACCTTCCCATTAAAACTAAATGGCATGCTTGGTTTGCCTATGGAGAGGTTGGTGGCTACACTGAAGTTTACAAAGGAGGCCTAACATTGGCTACAGTGAGAGGAGCAGGGCATCAAGTACCAAGTTACCAACCAGCAAGAGCTCTCTCTTTGATTATGCATTTCTTAAATGGCACCCCTCTGCCTGATACTAAAAGATATCAGTAG 1527 0.3851 MNIIMXRTSCSVFLSLLVLSSFVAEIHGSNNKQVQALNNLHKSKFRARSSSSSSSSDVTHKSEFEVEELHNYDDVIDSQEGLKEKDRILRLPGQPQVKFSQYGGYVTVDKSNGRAFYYYFVEAQNSKDTLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLYKNRYSWNYAANVLFLESPTGVGFSYSNTTSDYKTNGDKKTAADNYLFLVNWLERFPEYKNREFYISGESYAGHYVPQLAHTILYHNKRAKRTIINLKGILIGNAVINDDTDNKGMYDFLATHAIISDQTASDIEKFCDFSSSKTTSECDDASYEADKNIYYIDLYNIYAPDCKNNNLTAYPKKPSIVTDPCSESYVHAYMNREDVQEALHANVTKLVYDWDLCSNVIGRWGDSSTTVLPLLHEFLNNNLRVWIFSGDIDGRVPVTSTKYSIKKMNLPIKTKWHAWFAYGEVGGYTEVYKGGLTLATVRGAGHQVPSYQPARALSLIMHFLNGTPLPDTKRYQ* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1484 508 ProSitePatterns Serine carboxypeptidases, histidine active site. 468 485 IPR033124 GO:0004185
Amo13g1484 508 SUPERFAMILY alpha/beta-Hydrolases 90 502 IPR029058 -
Amo13g1484 508 PANTHER CARBOXYPEPTIDASE 11 502 - -
Amo13g1484 508 ProSitePatterns Serine carboxypeptidases, serine active site. 231 238 IPR018202 GO:0004185
Amo13g1484 508 Gene3D - 403 498 - -
Amo13g1484 508 Gene3D - 357 393 - -
Amo13g1484 508 PRINTS Carboxypeptidase C serine protease (S10) family signature 468 481 IPR001563 GO:0004185|GO:0006508
Amo13g1484 508 PRINTS Carboxypeptidase C serine protease (S10) family signature 217 242 IPR001563 GO:0004185|GO:0006508
Amo13g1484 508 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 191 IPR001563 GO:0004185|GO:0006508
Amo13g1484 508 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 180 IPR001563 GO:0004185|GO:0006508
Amo13g1484 508 Gene3D alpha/beta hydrolase 82 340 IPR029058 -
Amo13g1484 508 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 502 IPR001563 GO:0004185|GO:0006508
Amo13g1484 508 Pfam Serine carboxypeptidase 92 498 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1484 Amo-Chr13 19912768 19918321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1484 365 501 Calmodulin-binding Proteins AT2G22960 31.387 2.02e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1484 K16297 - gmx:100804815 731.865