Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1473 ATGGGGTACCTCAGTTTCTCTTGCAGAGCTGAATCCGCAGTTTCAACCTCCAATTCACTCACACCATCACCTTCTTCTTCTTCTTCTTCCACCACCACCACCTCAAAGAAACAGAACAACAAAGAAAAAGAAAAACCCATCAAGATCCAACACTTCCATTACAGTGACCTTGAAGCTGCCACCAATGGCTTCTCAGAGCGCAAGCTCCTCGGCAAAGGAAGCCATGGTTATGTCTATAAAGCTGTTGTACGTGGCCGTCCTGTGGCAGTGAAAAGACCATCAAGACCCCATCATCATAATTTACCTCCAAAACCATCGCCAATGGTTTCTTCTTCTTCTTCCTCTGCATCTGCACCAGAGTTCATCATCAGCAACAACGAGGTTGACAACGAGATCGATATCTTGTCCAAAATCCAGAGCCCGAGGCTGGTGAACCTGGTTGGTTTCACAAATGATTCACAGGACAGGCTTCTGGTTGTTGAGTTCATGAGCAATGGAACACTCTATGATGTTCTTCATTCTTCTTCTTCTTCTAATAATAACAATAACAACAAGCTTCCGAATTGGGGAAGAAGGGTTCGTTTGGCATTGCAAACTGCAAAGGCAATTGATACCCTTCATTCATCAACACCACCTGTGATCCACAGAGATATTAAATCAGCAAATGTTCTGATTGATAGAAACTTCAATGCAAGGTTAGGTGATTTTGGTTTGGCTCTTATGTGCCATGTTGATGATTATAGACTAAGGTCAACTCCACCAGCTGGCACAATGGGGTACCTTGATCCTTGTTATGTTACTCCTGATAATTTGAGCACTAAAAATGATGTCTTTAGTTTTGGGATTTTGTTGCTTGAGATTATTAGTGGAAGGAAAGCCATTGATGTAACATATTCACCACCTTCTATTGTGGATTGGGCCATTCCATTGATAAAGAAAGGGAAGCTTATGAGTGTTTATGATCCAAGGATTGCTCCTCCTAAGGATCCTATTGTGAGGAAGCAATTGGCTTTGATTGCTGCAAAGTGTGTTAGGAATTGTAGGGAGAGAAGGCCTTCCATGAGTGAGATTGTGAATTGGCTCAATGGTTTGTGTAAATTGGTTCCTCTTCATTCATGGAATGGTTTCAATAATCCTTGCATGATGGTTGAGACTATGGGAAGGCCAGTTGAAGCAGCAACAAGAAATGATTCTAATAATAATAATGAGAAAGACAAAATGAGTTCAAGATTGGAACTTGATTTCTTGGATGAGAGGTTGTCTAAATCTGCAATGAGGTATTCAAGGAGGGTCTATTCTGATTTGGGATTTAGTAGTAACTTGATGGATCTTATGGCTACAACTGAGGAGCCTGAGTTTCTAAGAGATGCTGATGGTAATGGTAATGGTGTTTTGGAGCATAGTTCAAGTTCTAAATCTGCTGAACAAGTTTCTTCTTCAAGCTCAAGGTTTGGAAGTGGAAGGTATTTCACAAAAGGAAGAAACTTTTATAAGCCTTGTGGTACTTATAAGGATGTATTGGATTTGAGTAAAGGCCAAATTGTTGGTGGTGATGATAATGGTGCTTCTTGTTCTAATTTGAATTCTCTTGCTGCTGAGGCTGTTTAG 1608 0.408 MGYLSFSCRAESAVSTSNSLTPSPSSSSSSTTTTSKKQNNKEKEKPIKIQHFHYSDLEAATNGFSERKLLGKGSHGYVYKAVVRGRPVAVKRPSRPHHHNLPPKPSPMVSSSSSSASAPEFIISNNEVDNEIDILSKIQSPRLVNLVGFTNDSQDRLLVVEFMSNGTLYDVLHSSSSSNNNNNNKLPNWGRRVRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLALMCHVDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKNDVFSFGILLLEIISGRKAIDVTYSPPSIVDWAIPLIKKGKLMSVYDPRIAPPKDPIVRKQLALIAAKCVRNCRERRPSMSEIVNWLNGLCKLVPLHSWNGFNNPCMMVETMGRPVEAATRNDSNNNNEKDKMSSRLELDFLDERLSKSAMRYSRRVYSDLGFSSNLMDLMATTEEPEFLRDADGNGNGVLEHSSSSKSAEQVSSSSSRFGSGRYFTKGRNFYKPCGTYKDVLDLSKGQIVGGDDNGASCSNLNSLAAEAV* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1473 535 MobiDBLite consensus disorder prediction 463 483 - -
Amo13g1473 535 ProSitePatterns Protein kinases ATP-binding region signature. 70 91 IPR017441 GO:0005524
Amo13g1473 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Amo13g1473 535 Gene3D Transferase(Phosphotransferase) domain 1 163 369 - -
Amo13g1473 535 MobiDBLite consensus disorder prediction 13 48 - -
Amo13g1473 535 Gene3D Phosphorylase Kinase; domain 1 33 162 - -
Amo13g1473 535 MobiDBLite consensus disorder prediction 456 483 - -
Amo13g1473 535 ProSiteProfiles Protein kinase domain profile. 64 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1473 535 MobiDBLite consensus disorder prediction 13 36 - -
Amo13g1473 535 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 1 513 - -
Amo13g1473 535 MobiDBLite consensus disorder prediction 89 115 - -
Amo13g1473 535 SUPERFAMILY Protein kinase-like (PK-like) 47 373 IPR011009 -
Amo13g1473 535 SMART serkin_6 64 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1473 535 Pfam Protein kinase domain 65 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1473 535 PANTHER OS01G0750732 PROTEIN 1 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1473 Amo-Chr13 19839096 19840744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1473 23 362 Receptor kinase-like Gene Family AT3G59420 40.805 2.49e-72 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Amo13g1473 Pkinase 6.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1473 - - adu:107477472 954.125