Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1465 ATGGAGCAATTCACAAGCCAACCTCTTTCGTCTTCGAGCAAGAAGGATGATAGAAGGCTCATAGAGAGCCATAGAAGGATCCTGATGAAGAACCTCTACTCCAAACTCAACTCTCTTCAACCTAATTCTAACACCAAGAAAGCGTTGCCGGATCAACTGGATGAAGCCATCAACTACATAAAGAGCTTAGAGGAGAAGGTGAAGATGGCTGAGGACAAGAAACAGTCCTTATTGCTTGTTATGGCAACTTGCTTGGATACGCAGTTCATGTTCAATGAGATCATTCGCGTGCTGCACGAAGATCACCACATCGATTTCGTGCACTCAGACCTTATAGCCAAGCTCATGGACAAGCTGTTGATCCTTGACGATCTCATAGAAAAGTTGCAGTTTTCAGAAGGAGAAAGTGGAGACAGAGCTGATGAGAAATTGAAATGGTTACATCTAATGCAAGATGTTGTTCGTTTGGAAGAACATCATCTTTTGCAGAAAATGGATTCTGTTGATTCTATGAGTTTGCAGAAGCTACTGAAGCGTTTCAAGTCTCAAATATGTCAAATCCTTTACTTCATTCTCATGAAGGGGAAGAAGGATAACCTTGTCCTTGCCCTTGCCATTGGCAAAGCAGAAGACCTTCATACTCTGCCAGAATTACCTTTATCTTATGTCAAAGATTGCTTATATGGCAGAGGTGAAGAAGAGAAGTATATACTGGAAAGCCTACTGTTATCAAGCGAACAGCGAAAACAGATCAAGGTGATTAGCATAGTGGGAAAATCCGGGGTAGGCAAGACTTCATTGGCTGATGCTGTTTATTTCAACCCCAAGGTTTTGGAGTGTTTTGATCTTAGAGCTTGGGTTACTTTTCCCCACAAAGTCACTGCTACCTTCGTTGCAAAGAAAATTCTTGAAGAACTAGTTACTGATGATGATGGGGAGGAGGAGCTTGTTCCCGGTGATGATTTCGATAACTTGAAGAAGAGATTTGCTGGGAAGAAACTTCTGCTGGTATTAGATGATATTATGGTTGAAGATGATGGCTTACACAAGTGGGACATGTTAATTGCTTCCCTTGAATCTGCAGCAGCAAGAGGGAGTGCCATAATGCTAACCTCTATTCCCCATGACAATCCAGAACTACTCATGATACCTGCTTGTCATACTGTGCATCTTGATTCGCTGTCAGCGGAGGATGCGCTGTCAATCTTCTTGGTGCATGCTTCTTCTGGGCGGACGGACCTTCACGAACACCCTGCAGAGTTAGCAGCAGTTGGCAAGGAAATCGTTGGAAAATTGGGAAACCTTCCCCTGGCTGCAAAAATGATAGGGAGCCTCTTTCAAGATAAGCGAAATCCGGATCAATGGGTTGAGATATTGAGGAGTGAATTGCTGGATGCAGGCCATGCAAATCTCCTCCCAATTCCTCCATTTCTAGTACTATGCTACCTTGATCTCCCTGCGCGGATCAAACAATGCTTTCTTCATTTGTCACTATTTCCAAAGGGTTATCAATTAAAGCGGAAGCAGGTGGTCAACTTGTGGATAGCCGAGGGCTTTGTGGAAATCCCTGATTTTCAATCGAGTTTTAAGAGCTCTGAAGACATTGGTAATGCATACTTCAGTTATCTAGTAATGAGGTCATTTTTGCAGCCTATTCGGTCTAGTGTTAGTTTTATAATGCATAATCTGGTTCATGACTTAGCAACCTACATGGTAGAGAAGTTAAACGATTGCCATTTATCCTCTAATCAAAGCACAGAGGGAATAAGCAATTTGATAAACTTGCTCCACCTTGATATGAAAGGTAGCAGTGTGCAAGCAATGCCTTTGAAAATTCCTGAATTTACAAGATTAGAAAAGTTAGCAAGGATGGAAGAAACTACTATGAGTGAGTTTGAAGAAATTCCTGATGAAGCAGAGATGGAAACTGAATCCACAAGAAGGAGATTGCCACTTCATTTGTCAGCCTCAGATATACCCAGTTTGAAGAGAACTGATATTCTTAGTCATGAGGTTGAAGCTGATATTCCCAGTTTTGAACAGCAAATAGACCCAAAATCTTCAATGGCTAAAGCTGAGATTCCAGCGAGCATAAAACAAGAAGCTGTCCTTCCTCTTATGGATACACCTAACACAACTGCTCCTGTCAAGGTAGAAGCTTTAACCAGAGAAGATTTGGATGATGACAAACCATCCTTCAAAGTAGTAAGGGTTTCAACTATATCACAATTCAAGTCCTTGCCTGCCAATCTGCACAGCCTAAAAATTGAAGGGTGTGAATCCTTGGAGGTCGTTCCAGATGATTTATTAGGGGGAATAACTACTCTTAAGCAGTTGTATCTAATCAGTTGTTCTTCTCTTAGATCCTTTCCTTACCCCGGTTCCTTGACATCACTTTACATCCGAAACTGCAGAAGATTAGAATTTCTCCCATCTGCAGTATCAAGAAAGAGGCTTCCCTTTCTCCATCATTTGTCCATAGGGAGCAGCTGTGATTCTGTCACTACCTTGCCCTTAAATCTCTTTTGTCAACTCAAAAGTCTTTGTATATGGGATTGCCTCAATCTTCGATCGTTTCATTTTACTGGGGAACCTAGAGGTGATCTTACATCTCTGGAGTCACTAGAGATTAGAGAGTGCCCAAGATTGGAATATTTCCCAGAGGAAGGACTGCATGCTCCAAGGCTAGCATCCATTTTACTTTCGAACTGCAAGAATCTTAAAAACTTGCCAAATGCTATGAACTCTCTCGTATCACTCAAGTCATTATTTTTACATAGATGTCCACAGATTGAATCTTTTCCCCTTGGGGGATTGCCTTCAAATTTGGTTTTTCTATCCATAGCTTACTGTGACAAACTTATACCACAAAAGGATTGGGGGCTGTACAGTCTTGAGTCTCTCAGTTATTTTGAGCTTGAAGGTGGATGCATAGGCATGGAGTCATTTCCAGAGGAGAATTTACTACCTTGCAATATCATCTCTTTACACATAAGCACATTGAAGAGTCTGAAGAATCTGGACTGCAAGGGGTTTCAACACCTGAATGCTCTTCAGACACTGGAAATTCATTGCTGTGACATGCTTCAATCCTTGTCCAATCACGGGCTTCCTTCGTCCCTGGAGAATCTCTGCATTCAGGAATGCCCATTGTTAACTCTTAAGCTTGAATCCATGATGGGTGATGAATGGCATAAGGTGGCTCATATTCCAGACATCCAAATTGATCACCAAGTACTCTCTTGA 3246 0.4187 MEQFTSQPLSSSSKKDDRRLIESHRRILMKNLYSKLNSLQPNSNTKKALPDQLDEAINYIKSLEEKVKMAEDKKQSLLLVMATCLDTQFMFNEIIRVLHEDHHIDFVHSDLIAKLMDKLLILDDLIEKLQFSEGESGDRADEKLKWLHLMQDVVRLEEHHLLQKMDSVDSMSLQKLLKRFKSQICQILYFILMKGKKDNLVLALAIGKAEDLHTLPELPLSYVKDCLYGRGEEEKYILESLLLSSEQRKQIKVISIVGKSGVGKTSLADAVYFNPKVLECFDLRAWVTFPHKVTATFVAKKILEELVTDDDGEEELVPGDDFDNLKKRFAGKKLLLVLDDIMVEDDGLHKWDMLIASLESAAARGSAIMLTSIPHDNPELLMIPACHTVHLDSLSAEDALSIFLVHASSGRTDLHEHPAELAAVGKEIVGKLGNLPLAAKMIGSLFQDKRNPDQWVEILRSELLDAGHANLLPIPPFLVLCYLDLPARIKQCFLHLSLFPKGYQLKRKQVVNLWIAEGFVEIPDFQSSFKSSEDIGNAYFSYLVMRSFLQPIRSSVSFIMHNLVHDLATYMVEKLNDCHLSSNQSTEGISNLINLLHLDMKGSSVQAMPLKIPEFTRLEKLARMEETTMSEFEEIPDEAEMETESTRRRLPLHLSASDIPSLKRTDILSHEVEADIPSFEQQIDPKSSMAKAEIPASIKQEAVLPLMDTPNTTAPVKVEALTREDLDDDKPSFKVVRVSTISQFKSLPANLHSLKIEGCESLEVVPDDLLGGITTLKQLYLISCSSLRSFPYPGSLTSLYIRNCRRLEFLPSAVSRKRLPFLHHLSIGSSCDSVTTLPLNLFCQLKSLCIWDCLNLRSFHFTGEPRGDLTSLESLEIRECPRLEYFPEEGLHAPRLASILLSNCKNLKNLPNAMNSLVSLKSLFLHRCPQIESFPLGGLPSNLVFLSIAYCDKLIPQKDWGLYSLESLSYFELEGGCIGMESFPEENLLPCNIISLHISTLKSLKNLDCKGFQHLNALQTLEIHCCDMLQSLSNHGLPSSLENLCIQECPLLTLKLESMMGDEWHKVAHIPDIQIDHQVLS* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1465 1081 PANTHER DISEASE RESISTANCE PROTEIN RP 142 933 IPR044974 GO:0006952
Amo13g1465 1081 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 63 IPR011598 GO:0046983
Amo13g1465 1081 PANTHER OS05G0492600 PROTEIN 142 933 - -
Amo13g1465 1081 Gene3D - 393 470 IPR042197 -
Amo13g1465 1081 Pfam NB-ARC domain 243 459 IPR002182 GO:0043531
Amo13g1465 1081 Gene3D - 214 376 IPR027417 -
Amo13g1465 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 496 IPR027417 -
Amo13g1465 1081 Gene3D - 7 84 IPR036638 GO:0046983
Amo13g1465 1081 Gene3D Ribonuclease Inhibitor 939 1062 IPR032675 -
Amo13g1465 1081 Gene3D Ribonuclease Inhibitor 793 938 IPR032675 -
Amo13g1465 1081 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 13 81 IPR036638 GO:0046983
Amo13g1465 1081 Coils Coil 53 80 - -
Amo13g1465 1081 SUPERFAMILY L domain-like 552 1064 - -
Amo13g1465 1081 PRINTS Disease resistance protein signature 328 342 - -
Amo13g1465 1081 PRINTS Disease resistance protein signature 253 268 - -
Amo13g1465 1081 PRINTS Disease resistance protein signature 432 446 - -
Amo13g1465 1081 PRINTS Disease resistance protein signature 867 883 - -
Amo13g1465 1081 Gene3D - 478 570 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1465 Amo-Chr13 19665115 19668717 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1465 10 109 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 30.769 6.54e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1465 - - ahf:112737308 2086.61