Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1458 ATGGGACTCAAATTCCACACAAGACAAGAACAAGGAGAAGAGAAGGAGATGGGTATTTGGAAGGGTAAAGAAGAAGAGGTTGCCTTCAATTGCAGCCCCACCACCACCACCACCAACAACAACACAGCAACACTTGTGAGTGAAGCAGAGGAAGAAGAGAGCAAGAAACATGCTTTAACAGTGGCCATTGCCTCAGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGAGGTTGTAAGGCTCACTGGGGTCCCACAATCTTCCCACAAACCTAAACATAATTCAGAAGAATCTGATGAAACTAGGGATGTTGCTTCTCATTCCATAAGCCAGTGCCAGAGGAATAATATCAAAGAATTTGCAGCCATCAAAATTCAAACTGCATTTAGGGGTTACTTGGCTAAGAAGGCTTTGAGAGCATTAAAGGGAATAGTAAAGCTTCAAGCCATAATTCGTGGCCGAGCAGTAAGGCGCCAAGCCATGAGTACTTTGAAGTGCTTGCAATCCATTGTGAGTATCCAGTCACAGGTCTGTGCAAGAAGACTCAAAATGGTTGAAGGAAGCTGGGATTATTGCACTGAAAATGAAGAGATGCATGATTCAAAAGACAAGATAATAAGGATGGACTCAAACAGTGAAAGAAAGTGGAGTGACATCACCTTATTGAAGGAAGAGGTAGATGCCTCTTGCATAATCAAGAAAGAAGCAGTTCATAAGAGAGAAAGAATAAAAGAATACTCATTTAATCACAGAAGGTCAGCAGAATCAGAAAGAAGTAAAGTGAATGGAAGATGGAGGTACTGGCTGGAACAATGGGTGGATACACAGCTTTCAAAGAGCAAAGAGCTTGAAGATTTAGACTCAGTTTTCAGCTCAAATTCAAGAGGTGGTGAAGAATATTATGGAGGAAGACAACTTAAGCTGAGAAACATGCATAGACAACAAAGTCCATTTGAAGGTTTAGATTCTCCAATAGTTTCTTCAAGAAAAGTTTTTACTCATAGGAAGCAGTGTTCAGTGGGAGAAAACCAATCATTCTCAAGCTCTTCTCCGGCGACTCCGGCATACATGGCCGCAACAGAATCAGCAAGAGCAAAAGCAAGATCAACAAGCTCCCCAAGAGTAAGGACAGGTCATTTGGACAGTGATAGTAGCTATTCACCATGCAAGAAGAAGCTATCTGTTGTGTCTAATGTTAACAGTGAAGTGCTTAGTAATAATGGTAGAAATGGCAACAAGTTCGGTGGTTGTAATCAACAAAGGTCACCAAGCTTTAAGGGACTTCCATTGCCTATAAAATCAAGCAGGACTATCATAAAGGATCTCAGCATCAATTCAGATTGCTCACTGCCCAATTGGGATAATAGACAAAGTTCCTTTAAATGA 1383 0.4179 MGLKFHTRQEQGEEKEMGIWKGKEEEVAFNCSPTTTTTNNNTATLVSEAEEEESKKHALTVAIASAAAAAAAAAAEVVRLTGVPQSSHKPKHNSEESDETRDVASHSISQCQRNNIKEFAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQVCARRLKMVEGSWDYCTENEEMHDSKDKIIRMDSNSERKWSDITLLKEEVDASCIIKKEAVHKRERIKEYSFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEDLDSVFSSNSRGGEEYYGGRQLKLRNMHRQQSPFEGLDSPIVSSRKVFTHRKQCSVGENQSFSSSSPATPAYMAATESARAKARSTSSPRVRTGHLDSDSSYSPCKKKLSVVSNVNSEVLSNNGRNGNKFGGCNQQRSPSFKGLPLPIKSSRTIIKDLSINSDCSLPNWDNRQSSFK* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1458 460 MobiDBLite consensus disorder prediction 401 424 - -
Amo13g1458 460 MobiDBLite consensus disorder prediction 89 103 - -
Amo13g1458 460 MobiDBLite consensus disorder prediction 363 385 - -
Amo13g1458 460 MobiDBLite consensus disorder prediction 340 385 - -
Amo13g1458 460 Pfam Protein of unknown function (DUF4005) 341 408 IPR025064 -
Amo13g1458 460 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Amo13g1458 460 PANTHER IQ-DOMAIN 5-RELATED 35 445 - -
Amo13g1458 460 MobiDBLite consensus disorder prediction 82 107 - -
Amo13g1458 460 MobiDBLite consensus disorder prediction 340 355 - -
Amo13g1458 460 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Amo13g1458 460 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Amo13g1458 460 MobiDBLite consensus disorder prediction 7 22 - -
Amo13g1458 460 MobiDBLite consensus disorder prediction 1 22 - -
Amo13g1458 460 Gene3D - 116 168 - -
Amo13g1458 460 MobiDBLite consensus disorder prediction 401 428 - -
Amo13g1458 460 PANTHER IQ-DOMAIN 11 35 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1458 Amo-Chr13 19498427 19501548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1458 119 460 IQD Protein Family AT5G13460 51.130 2.59e-98 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1458 - - ahf:112789375 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1458 13 19498427 19501548 Amo13g1458 13 19498427 19501548 ECH