Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1455 ATGGACTCAGGTTCACCGCACCAATGGATAAGGGAGCCGAGATTGGAAGACAGCAACACCTCAAATCCATTTGATCTTCTTTACGAATGTGCCAAATTTGTTGCATCAGGAAGCATAAAAAATGCAGACATAGCACTTGAATACATCTCTCACCAGTTGTCTCCGGACGGCGCAGCAGCGCAGCGAACGGTGACTTATTTCAGCGAAGCTCTGGCTTCCAAGATAGTCAAGAATCTTCCAGGAGTAGACAAAGCTCTAAACTCCTCAAAGAGATTAACTGCTCCTGAAGAAATCCTTGTCCAGAACTACTTCTATGAGTTGTTTCCATTTCTGAAATGTGCTTACTTGACTGCAAATCAAGTCATAGTTAAAGCGATGGAAGGCGAAAAAATTGTTCATATAATTGATCTGCATTGTGCAGAGCCGGTTCAATGGATTAACCTCTTGATGACATTGAATGAGCGTCCTGAAGGACCTCCTCATTTGAGGATCACAAGCATTCATGATAAGAAAGAGGTTTTAGATCAGATGAATGCTAGTTTGACAAGAGAAGCAGAGAAATTGGATTTTCCTTTGCAGTTCAATCCTATAGTTAGCACTTTAGAAGATCTTGACATTGATAGTTTGCCGGTTCGCACAGGCGAGGCGCTTGCAATTTGTTCTGTCTTGCAGCTGCATCGCCTTCTAGCCACAGATGATGAAGCTCTAGGGAGGAATTCCCCGGCTGCAACGATTAATCTGCATAGAGCAGTGCATATGAACCGAAGAACTTTCGCAGAGTGGCTCGAAAGAGATATGATGAATTCATATATTTCAAGTCCTATCTCTGCTTTGTCACCTCCTCCTCTGTATCCTTCACCTAAGATGGAGGCATTTTTAAGAGATCTTCGCAAACTGCAGCCAAAATTAATGGTGATAACTGAGCAAGAGACTAATCTTAATGGATGCAGTCTTGTGGAGAGAGTTGAGAAAGCTTTGTACTTCTATAGTGCCTTGTTTGATTGCTTGGATTCGACCGTGCGAAGAACTTCCTTGGAGAGGAAGAAAGTTGAGAGTTTGCTGCTTGGAGAGCAGATAAAGAACATCATTGCATCTGAGGGGTTTGAGAGAAAGGAGAGGTATGAGAAGCTTGAGAATTGGATTCGGCGGCTCGATCTGGCCGGTTTTGTGAGGCTGCCTTTGAGAGACAATGATAAATTGCATGCTAAGGAGGTTTTGCACAACTATGGACACAAATATATGATTAGAGAAGGCCATGGTTGCTTACTTGTTTGTTGGGGTGATAGACCCCTTTTCTCCATTTCAGCATGGAGTTTTAGAGGATTAAATCTTTCTTTATAA 1341 0.4265 MDSGSPHQWIREPRLEDSNTSNPFDLLYECAKFVASGSIKNADIALEYISHQLSPDGAAAQRTVTYFSEALASKIVKNLPGVDKALNSSKRLTAPEEILVQNYFYELFPFLKCAYLTANQVIVKAMEGEKIVHIIDLHCAEPVQWINLLMTLNERPEGPPHLRITSIHDKKEVLDQMNASLTREAEKLDFPLQFNPIVSTLEDLDIDSLPVRTGEALAICSVLQLHRLLATDDEALGRNSPAATINLHRAVHMNRRTFAEWLERDMMNSYISSPISALSPPPLYPSPKMEAFLRDLRKLQPKLMVITEQETNLNGCSLVERVEKALYFYSALFDCLDSTVRRTSLERKKVESLLLGEQIKNIIASEGFERKERYEKLENWIRRLDLAGFVRLPLRDNDKLHAKEVLHNYGHKYMIREGHGCLLVCWGDRPLFSISAWSFRGLNLSL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1455 446 Pfam GRAS domain family 25 437 IPR005202 -
Amo13g1455 446 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 4 440 - -
Amo13g1455 446 ProSiteProfiles GRAS family profile. 14 438 IPR005202 -
Amo13g1455 446 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 440 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1455 Amo-Chr13 19474772 19476397 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1455 26 440 GRAS Transcription Factor Family AT1G50420 51.059 1.61e-144 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo13g1455 GRAS 7.6e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1455 - - gmx:100779726 575.474