Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1425 ATGGTGTGGACAGCTCCAACAGGCGACGAGTGTATGATTGAAGTAGCAGATGTGACCTGCTGCAGGAAAGGCGTCCTCTCAATTCAGGAAGTGCAACTCCCTGCACGTGATAAGAAAACATTATCAGCTTGTGTCCTGCCGCGCCGTCCGTCGCTCTCGGCGCCTCCCCACCGTCCATTGTACTCGACGATTCCGCGGCCTCCTCCTTCTCCCTGTGTCGAATCCAGCCACTCTCTTGTAGCTCGGGACGTCGTCTGGTTGAGGGTTGGAGCTACTTGCCGTGTGTTTGTTGCCGTCGTCTCTCCGTCGCCATCGTCTGTTCGTCGCTCTGATCTTCGTCGGAGAAGGAATAACAGTGGTCGTCGTCTGGTGGGCGTCCTGCTCGGCGTTGTCTACTCGCTGTCGCGCTCAGCTGCTCAGATCGAAGATCGGTGCACATTGCTATTGCTTGTTCTTCCTTTTTGGTGGTCTATGGAATACACTGGTCATAGCAAGAAATTCTGCATAGAGGATGAGAGCGAATGTTTTGGCGAAGTAGTCAGTTCAGATGCTGATGAATTTGATGTTGAGCAATTGGATCCAAGTGGGCAGGATGACCTGTCGAATTATGGAGATGTATTTGGTCTTACTGCAGCTAAAATAGAGAACAAGGTTTTCAGAACTGAGGAGCGTGCTTATGAATTCTATATGAGGTTTGGGAAGTGCCATGGGTTTGGTGTACGCAAGGGAGACTATGGGAAGGATGATGACAGAAATGTAATTAGGAGGAGATTCTTTTGCAACAGAGCTGGGTTAAGGGATGAAAAGCACTATAATAGATTAGACAGAAAAAGATTTCATAAGCCTGAGACACGAACGAACTGCCAGGCTAAGTTGTCGATATATCTTGACAAAGAAAGTTCGAACTGGAAGGTCTGGAAAGTCATCCTCGAGCACAACCATGAGTTAGTAGCTAGGTGTATGGTACACTTGATTCCAAAGTTCCGTCGGGTTTCAGGTGCGGCAAAGGATCAGCTAGATGTCCTTCGTGAATATCAAAATAATGAGATGGTTGCACAGTTCAACTCCATCTATAACGTCCCTGTTATGACGACGTGCCTTGATCCAATCGAAAAATGTGCTGCCATGGTATATACGCGGACCATTTTCACCAACGTGAAAAAGGAGATAGATGCGGTTGGAGCTCTAAACTTTGTTAGTAAGCGGAGGGTGTCGACGACGGTAGTGTAA 1230 0.4805 MVWTAPTGDECMIEVADVTCCRKGVLSIQEVQLPARDKKTLSACVLPRRPSLSAPPHRPLYSTIPRPPPSPCVESSHSLVARDVVWLRVGATCRVFVAVVSPSPSSVRRSDLRRRRNNSGRRLVGVLLGVVYSLSRSAAQIEDRCTLLLLVLPFWWSMEYTGHSKKFCIEDESECFGEVVSSDADEFDVEQLDPSGQDDLSNYGDVFGLTAAKIENKVFRTEERAYEFYMRFGKCHGFGVRKGDYGKDDDRNVIRRRFFCNRAGLRDEKHYNRLDRKRFHKPETRTNCQAKLSIYLDKESSNWKVWKVILEHNHELVARCMVHLIPKFRRVSGAAKDQLDVLREYQNNEMVAQFNSIYNVPVMTTCLDPIEKCAAMVYTRTIFTNVKKEIDAVGALNFVSKRRVSTTVV* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1425 409 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 215 341 - -
Amo13g1425 409 Pfam FAR1 DNA-binding domain 227 317 IPR004330 -
Amo13g1425 409 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 215 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1425 Amo-Chr13 19142799 19146621 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g1425 FAR1 1.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1425 - - ahf:112737376 389.808