Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1424 ATGAAGACACCTTTCTTCTTTTCCTTCTCCCTCTTCTTCTTCTTCTTCTACTGCCACACCCTACTTGTCTTCTCTGCTACCACCTTACCCCTCCAACTCATCTCTCTACTCTCAATAAAATCATCCCTCATAGACCCTAACAACATCCTCCATGATTGGGACCCTTCTTCATCCTTCTCCTCCAACACCGAAAACCAAGACCACCCTATATGGTGTTCATGGACAGGCATCATTTGCCACTCAAAAACATCACAAATCACCACCTTGGACCTCTCAAACCACAACTTCTCAGGCACAATCTCACCCCAAATCAGGTACCTAACTACCCTCAACCACTTGAACCTAAGTCGGAATGTCTTCAGTGGAACCTTCCAAGCTGCAATCTTTGACCTCAGCGAACTCAGGACTTTGGATATCAGTCACAACTCCTTCAACTCAACGTTCCCACCGGGGATATCTAAGCTCAAGTTCTTGAGAGTCTTAAATGCTTACAGCAACAACTTCATTGGACCTCTCCCACAAGAACTCTCCATGCTTCGCTTCCTTGAACACCTCAACCTTGGAGGAAGCTACTTCAATGGCACAATCCCACCAAGTTATGGCTCCTTGGCCAGACTCAACTTCTTATACCTCGCCGGGAACTCATTGGTAGGTCCAATTCCACCGCAATTAGGCTACCTCAGACAGCTACAACACATGGAAATTGGTTACAATCCATTGGAATCAACATTACCAACAGAGTTAGCAATGTTAACAAATCTCAGCTACTTGGACATCTCAAGTACTAACATCACAGGTCCTCTGATTCCAGAACTTGTTGGGAACTTAACAATGCTGGAGACACTGTTGCTGTTCAAGAATAAGTTAACGGGTGAAATCCCAAGAAGCATAGGGAACTTGAAGTTACTGAAAGCTCTTGATTTGTCAGATAACAAGCTCACGGGTTCAATTCCGGAAGAAATCTCAATGCTGAAGGAACTCAACTTCTTGGGCTTGGAACTGAACAATCTAACAGGGTCAATTCCACAAACAGTTGGTGACCTTCCAAACTTGAACTTCCTCCTTCTCTTCAACAACTCACTCACCGGAATTCTTCCTCAGAAGCTCGGCTCCAACGGTTTGTTACAGAAAGTGGATGTTTCAACCAACTTTCTAGAAGGTCCCATTCCTCCAAACCTCTGCAACGGCAACAACCTCAACAGGCTCATCCTCTTCTATAACCGTTTTAACGACTCGCTTCCGAGTTCACTTGTTAACTGTATCTCCCTCTCCAGGGTTCGCATTCAGAATAACCGCTTCAACGGTCAAATTCCGTTAGGTCTTGGTCAACTCCCTAACCTGACGTTCCTTGACATCAGCGACAACGAATTCACCGGGAGAATTCCCGAGGATTTCGGCAATGCCGTAAGGCTTCAGTTCTTGAACATCTCCGGCAACGCGTTTGAGAGCGCGTTGCCGAGCAACATATGGAACTCCACCAGCCTCCAGATCTTCTCCGCTGCGGGTTCCAAGATCACCGGTGAGATTCCCGACTTCGTAGGGTGCAAGAACATATACAGGATCGAGTTGCAGGGGAATTCACTTAACGGAAGCATTCCGTGGGATATTGGAAACTGTGAGAAGCTGATTCAGCTGAATCTGAGTAGAAACTCGCTCACCGGAATCATTCCATGGGAAATCTCAGCGCTGCCTTCGATCACCTACGTGGATCTCTCGCACAACTCGCTCACCGGAACTATTCCTTCGAACTTCAACAACTGCACCACGCTAGAGAACTTCGACGTCAGTTTCAACTCCCTCACCGGACCTATACCTTCGTCGGGGATCTTCCCGAACCTCCACCAGTCGGAATTCTCCGGCAACCCCGGCCTATGCGGCGGCATGGTCGCGAAGCCATGCGCGGCTGAGACGCTAGGCTCGGAGGACAACCAGGTCGACGGTCGACGACAGCAGCCGAGGAAAACTGCCGGCGCGATCGTGTGGATCGTTGCAGCGGCGTTTGGGATCGGAGTTTTCGTCCTCGTAGCGGGGACACGGTGCTTCCACGCGAATTACGGCCGCCGTTTCGGTAACGACGGGCAGGAGATGGGACCGTGGAAGTTAACGGCGTTTCAACGACTGAATTTCACGGCGGAGGATGTGTTAGAGTGTTTGTCGATGTCTGATAAGATCTTAGGGATGGGGTCCACTGGAACGGTTTACAGAGCGGAAATGCCAGGTGGCGACATCATAGCGGTTAAGAAGCTGTGGGGAAAGCAAAAGGAGAATATCCGACGGAGGAGAGGGGTGCTTGCTGAGGTGGAGGTGTTGGGGAACGTGAGGCACAGGAATATAGTGAGGCTGTTAGGGTGCTGCAGCAACAGAGAGTGCACCATGCTGCTTTACGAGTACATGCCCAATGGGAACTTAGATGACTTGTTGCATGGCAAGAACAAGGGTGATAATCTCGTTGCTGATTGGTTCACTAGGTACAAGATTGCCCTTGGTGTGGCGCAGGGGATTTGCTACCTTCACCATGATTGTGATCCTGTTATCGTGCATCGTGATCTAAAACCTAGTAATATATTGCTAGATGCTGACTTGGAGGCCAGGGTGGCGGATTTTGGGGTGGCTAAATTGATCCAGACCGATGAATCCATGTCTGTCATCGCTGGATCATACGGCTACATTGCCCCCGAATACGCCTATACTCTTCAAGTGGATGAAAAGAGTGACATTTACAGCTATGGGGTGGTGTTAATGGAGATCTTAAGTGGAAAACGTTCAGTGGATGCAGAATTTGGAGATGGGAATAGCATTGTTGATTGGGTGAAGTCAAAGATAAAGAGCAAAGATGGGATAGATGATATATTAGATAAGAATGCAGGTTCAGGGTGTTCCTCAGTGAGGGAAGAGATGATACAAATGCTTAGAATTTCATTGCTTTGCACAAGCAGGAACCCAGCTGATAGGCCTTCAATGAGGGATGTAGTGTTGATGCTTCAAGAAGCCAAGCCCAAAAGGAAGTTGCTTGATCTGGATAGTATTGTTATAGGTCGATGTGGCGGCGGCGGGGACAATGTGGTGGTTGGTGGTGGTGAAATTCCTTTGGCACAAAAGGCCACGGCGGAAAGCTAA 3117 0.4848 MKTPFFFSFSLFFFFFYCHTLLVFSATTLPLQLISLLSIKSSLIDPNNILHDWDPSSSFSSNTENQDHPIWCSWTGIICHSKTSQITTLDLSNHNFSGTISPQIRYLTTLNHLNLSRNVFSGTFQAAIFDLSELRTLDISHNSFNSTFPPGISKLKFLRVLNAYSNNFIGPLPQELSMLRFLEHLNLGGSYFNGTIPPSYGSLARLNFLYLAGNSLVGPIPPQLGYLRQLQHMEIGYNPLESTLPTELAMLTNLSYLDISSTNITGPLIPELVGNLTMLETLLLFKNKLTGEIPRSIGNLKLLKALDLSDNKLTGSIPEEISMLKELNFLGLELNNLTGSIPQTVGDLPNLNFLLLFNNSLTGILPQKLGSNGLLQKVDVSTNFLEGPIPPNLCNGNNLNRLILFYNRFNDSLPSSLVNCISLSRVRIQNNRFNGQIPLGLGQLPNLTFLDISDNEFTGRIPEDFGNAVRLQFLNISGNAFESALPSNIWNSTSLQIFSAAGSKITGEIPDFVGCKNIYRIELQGNSLNGSIPWDIGNCEKLIQLNLSRNSLTGIIPWEISALPSITYVDLSHNSLTGTIPSNFNNCTTLENFDVSFNSLTGPIPSSGIFPNLHQSEFSGNPGLCGGMVAKPCAAETLGSEDNQVDGRRQQPRKTAGAIVWIVAAAFGIGVFVLVAGTRCFHANYGRRFGNDGQEMGPWKLTAFQRLNFTAEDVLECLSMSDKILGMGSTGTVYRAEMPGGDIIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHGKNKGDNLVADWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDADLEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDAEFGDGNSIVDWVKSKIKSKDGIDDILDKNAGSGCSSVREEMIQMLRISLLCTSRNPADRPSMRDVVLMLQEAKPKRKLLDLDSIVIGRCGGGGDNVVVGGGEIPLAQKATAES* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1424 1038 SUPERFAMILY Protein kinase-like (PK-like) 722 994 IPR011009 -
Amo13g1424 1038 Pfam Leucine rich repeat 517 576 IPR001611 GO:0005515
Amo13g1424 1038 Pfam Leucine rich repeat 85 143 IPR001611 GO:0005515
Amo13g1424 1038 Gene3D Phosphorylase Kinase; domain 1 698 797 - -
Amo13g1424 1038 SMART serkin_6 719 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1424 1038 Gene3D Ribonuclease Inhibitor 196 242 IPR032675 -
Amo13g1424 1038 SUPERFAMILY L domain-like 57 386 - -
Amo13g1424 1038 Pfam Leucine Rich Repeat 446 467 IPR001611 GO:0005515
Amo13g1424 1038 Gene3D Ribonuclease Inhibitor 243 344 IPR032675 -
Amo13g1424 1038 Gene3D Ribonuclease Inhibitor 33 195 IPR032675 -
Amo13g1424 1038 Gene3D Transferase(Phosphotransferase) domain 1 798 1008 - -
Amo13g1424 1038 ProSiteProfiles Protein kinase domain profile. 719 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1424 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Amo13g1424 1038 Pfam Protein kinase domain 722 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1424 1038 SMART LRR_typ_2 203 227 IPR003591 -
Amo13g1424 1038 SMART LRR_typ_2 469 492 IPR003591 -
Amo13g1424 1038 SMART LRR_typ_2 300 324 IPR003591 -
Amo13g1424 1038 SMART LRR_typ_2 131 155 IPR003591 -
Amo13g1424 1038 SMART LRR_typ_2 444 467 IPR003591 -
Amo13g1424 1038 SMART LRR_typ_2 348 371 IPR003591 -
Amo13g1424 1038 SMART LRR_typ_2 563 586 IPR003591 -
Amo13g1424 1038 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 1 1024 - -
Amo13g1424 1038 ProSitePatterns Protein kinases ATP-binding region signature. 725 748 IPR017441 GO:0005524
Amo13g1424 1038 ProSiteProfiles Leucine-rich repeat profile. 302 324 IPR001611 GO:0005515
Amo13g1424 1038 SUPERFAMILY RNI-like 292 624 - -
Amo13g1424 1038 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 1024 - -
Amo13g1424 1038 PRINTS Leucine-rich repeat signature 563 576 - -
Amo13g1424 1038 PRINTS Leucine-rich repeat signature 303 316 - -
Amo13g1424 1038 Gene3D Ribonuclease Inhibitor 345 639 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1424 Amo-Chr13 19137386 19142057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1424 11 1002 Receptor kinase-like Gene Family AT1G08590 42.717 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo13g1424 Pkinase 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1424 - - adu:107495590 1987.62