Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1412 ATGGCAGAATCGCAAGAAGAACGTGTTTCAAGCGAGGGTCCTCCTTTATGCACATCACCTACCCGAAATTTATTAATGGAGGTAGATATAGTTGAACCGTTAATTTGTGTAGCCTCTGATGTTTCAGAAAATTTATCATACGAACATGAATACTTAGCCGACGATGTCGTAGGCCACGGTCACAAGTCAAACAAGGCCACGCAGTTGTCGGATGTTACGGATGTTGGAAGTGAAGAGATGGAGCTTGATGATGAGTTACCAGATCATGGTTGCCTACAAAAAGACGAGATACCAAGAGTTGGAATGCGGTTTACTCAGTTACAGATGGCTCATGACTTTTATGTTACCTATGCAAAGAAAGCTGAATTTGCAACTAAGATAAGGACGACAACATTTGACAAGATCACAAAGGCTCCCGTTAACAAAGCTATACACTGTAATGGCGACGGGATCCGCGAGTCTCGTGTTAAAGCACCAACGCGGAAGAATATGATTTCAACTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGACGTGCAAGACTGGGTTTTGTTCAAGGTTGACTTGACGCACTCACACCCCTGTTCACCAAGAAAGGCAGTGCACTACCATGAGTATAGGAAGCTGACCATGCATGCGAAGTGCGTGATCAAGGATAATGATGAGATCTGTATGATGATCGACGCATGTGGGTCCTAA 708 0.4379 MAESQEERVSSEGPPLCTSPTRNLLMEVDIVEPLICVASDVSENLSYEHEYLADDVVGHGHKSNKATQLSDVTDVGSEEMELDDELPDHGCLQKDEIPRVGMRFTQLQMAHDFYVTYAKKAEFATKIRTTTFDKITKAPVNKAIHCNGDGIRESRVKAPTRKNMISTAGCKARIYVKFDKDVQDWVLFKVDLTHSHPCSPRKAVHYHEYRKLTMHAKCVIKDNDEICMMIDACGS* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1412 235 Pfam FAR1 DNA-binding domain 112 199 IPR004330 -
Amo13g1412 235 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 50 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1412 Amo-Chr13 18996107 18999074 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g1412 FAR1 2.8e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1412 - - ahf:112733025 402.905