Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1406 ATGGTAGTTACAGAGATGATGGAATTACCAAGTGAAACGAATATGTGGGTTCCATCTATGGAGACTACGATGATAGTGTCCCCAATGGAGACAAGTTTTGTGTTGTCTCCTACTAGAGAAACGACGATAGGATTGCATAGCAAGTCAAACATGGAGGTGTTGCTTCCTGAAACTAAAACAGTAAATTTATTAGAAGAAACAAATGAATTGATGATCACAATGATACCACCATGGAAAGATTGTCGATTGATTTATCAGAACATGGAAAATACTCAAATTGCACAACACAATTCTACATTAATTACTTTTTCTAGGCCAATTATAGCAAAAAAAATACCAAAATTAAGCATGGAATTTGACACAGTACTAGAAGCTAAAGACTTCTGGAAAAATTATGGTAGAATGATGGGTTTTGATGTTCGACAATTGTATGCAAATAAATGCAAGGTTGATAATTCTGTGAGTAATTTTAGACTCATTTGTGCAAAGAAAGGCCAACGAAGACCAGATAAACGAGATAATTTAACAAAGCAACCTCGCGCTAAGACTAGAACAAGTTGCCAATTAAATCACAATCATATTTTGCAAATTTCAAAAACCAGTCATATGATGCCATCACAAAGAAAGGAAACACATGAACTAACAAGTTTACAAGCTGGTGGTAAAGATGTTCTTGGATATACCAAACAAGACCAAAAGAACTATCTTCGAAGCAAACGAAAGCGAGACTTGGCCTATGGTGAAGCAGTTTCAATTTCAAGAGGCATGGGATGCATTGCTTCAAAGATACAAGTGGAAGACCATCCTTGGTTGAAGAGTATTTATAAAGTGAAAGAAAAATGGGCTCATTGCTATATGAAGAAGGCGTATACTATTGGAATGCGAAGTACTCAACTTAGTGAAAGTTTTAACAGTGATTTGAAAGATTTTATGCGGTCAAGTTTAGACATAATACATTTTCTCAAACAATTTGAGCGAGTTGTTGGTGGCAAGCGATATAAGGAGCTACAAGCTGAATACAATGCAAGACAAAAGCTTTCTAGACTTAAAGATGATTCACTCGCCATTGTTAAAACTAAAGAAGCAAGAGAGATGATTGTTCATGACTCAGAGAAAAAAGTTGTTCAAAGTGATACTAGAGTGGATGCTACATCACGACACAACCAAGATGATGATGTTTCAAATATTTTGAATGCAAAAGAAATCGTTAATAGCTGA 1218 0.353 MVVTEMMELPSETNMWVPSMETTMIVSPMETSFVLSPTRETTIGLHSKSNMEVLLPETKTVNLLEETNELMITMIPPWKDCRLIYQNMENTQIAQHNSTLITFSRPIIAKKIPKLSMEFDTVLEAKDFWKNYGRMMGFDVRQLYANKCKVDNSVSNFRLICAKKGQRRPDKRDNLTKQPRAKTRTSCQLNHNHILQISKTSHMMPSQRKETHELTSLQAGGKDVLGYTKQDQKNYLRSKRKRDLAYGEAVSISRGMGCIASKIQVEDHPWLKSIYKVKEKWAHCYMKKAYTIGMRSTQLSESFNSDLKDFMRSSLDIIHFLKQFERVVGGKRYKELQAEYNARQKLSRLKDDSLAIVKTKEAREMIVHDSEKKVVQSDTRVDATSRHNQDDDVSNILNAKEIVNS* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1406 405 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 246 363 IPR031052 GO:0006355
Amo13g1406 405 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 112 190 IPR031052 GO:0006355
Amo13g1406 405 Pfam FAR1 DNA-binding domain 127 188 IPR004330 -
Amo13g1406 405 PANTHER OS02G0542200 PROTEIN 246 363 - -
Amo13g1406 405 PANTHER OS02G0542200 PROTEIN 112 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1406 Amo-Chr13 18822383 18824773 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g1406 FAR1 2.5e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1406 - - aip:107620925 325.094