Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1378 ATGGGCGGCAGAATTCAAAGTGTCACTACTATTTTTGTTATCATATTGGTTCTCTTAGGCACAGCATGTGATGCACAGTTATCTTCAACATTTTATGATACAACATGCCCCAATGCCCTTTCCACCATTCGAACCACCATTCGCACGGCGGTTTCTAAGGAGCGCCGCATGGCGGCTTCTCTTGTTCGCCTTCATTTCCATGATTGCTTTGTTCAGGGTTGTGATGCATCAATTTTACTAGATGATAGCCCCCCGACAATTGTGAGCGAGAAAGGTGCATTACCTAATAATAACTCAGTTAGAGGATTTGAAGTCATAGATCAAGCTAAAGCTGCTGTAGAGAAAGTATGCCCTGGAGTCGTTTCATGCGCAGACATTGTTGCTGTAGCTGCTCGTGATGCATCATTCGCTGTGGGTGGTCCATCATGGGTTGTGAAGCTTGGACGCAGAGATTCTACTACAGCAAGTATAACTTTGGCTAATGCTGACCTTCCACTTGCCTCAGATGATCTTAACACTCTCATCTCTCGTTTCAGTAACAAAGGATTTAGTGCAAAAGAAATGGTCACTTTATCTGGTGCCATACAATTGGCAAGCTCGATGTGTACATTCAGAAATAGAATATATGGTAACACAAGTGACATTGATGCTGGTTTTGCTAGCACTCGCCAACGTGGTTGTCCATCTTTGATTAACAACGACAACAATAAAAAGTTGTCACCATTGGACTTGAACTTGATTCAGAAGAAGGGTCTTCTTCAATCGGATCAAGTTTTGTTTAGTGGAGGATCTACAGATTCATTTGTTTCTGAGTATAGTAAGAATCCTACAACTTTTAAATCGGATTTTGCAGCTGCTATGATAAAAATGGGAGATATTTCTCCTTTGACTGGATCAGCTGGAATCATAAGAAAAATTTGCAGTGCTATCAACTAA 936 0.4135 MGGRIQSVTTIFVIILVLLGTACDAQLSSTFYDTTCPNALSTIRTTIRTAVSKERRMAASLVRLHFHDCFVQGCDASILLDDSPPTIVSEKGALPNNNSVRGFEVIDQAKAAVEKVCPGVVSCADIVAVAARDASFAVGGPSWVVKLGRRDSTTASITLANADLPLASDDLNTLISRFSNKGFSAKEMVTLSGAIQLASSMCTFRNRIYGNTSDIDAGFASTRQRGCPSLINNDNNKKLSPLDLNLIQKKGLLQSDQVLFSGGSTDSFVSEYSKNPTTFKSDFAAAMIKMGDISPLTGSAGIIRKICSAIN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1378 311 PANTHER PEROXIDASE 8 310 - -
Amo13g1378 311 ProSiteProfiles Plant heme peroxidase family profile. 26 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 Gene3D - 30 311 - -
Amo13g1378 311 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Amo13g1378 311 Gene3D Peroxidase, domain 2 165 290 - -
Amo13g1378 311 Pfam Peroxidase 44 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 PRINTS Haem peroxidase superfamily signature 272 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 CDD secretory_peroxidase 26 310 IPR033905 GO:0004601|GO:0042744
Amo13g1378 311 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 PRINTS Plant peroxidase signature 245 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 PANTHER PEROXIDASE 72-RELATED 8 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1378 311 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Amo13g1378 311 SUPERFAMILY Heme-dependent peroxidases 26 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1378 Amo-Chr13 18292209 18293986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1378 11 311 Peroxidase AT1G14550 60.443 8.22e-128 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1378 K00430 - gmx:100811641 472.626