Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1364 ATGACCACACCCCCACAAATGTTATTACCATTATTCTTCTTCAAACTAACCAACAACAATAAGCACATGCAATTCTTTCACATTCCCTATCATTCCAACACAAAAACCATGACCAAACTCAGCAATCTCAATCTCAATCTTAATCTCACAACCCCCCAACAAGATCTTCCCAATGGAAACAACATCTTCACACTTAGTCTTTTTCTAATGCAACATATCCAAATGTTGGAGATTCTTCTAGCAATCACTGTTTTCATAGTGATTCATTCTCTAAGGCAAAAGAAGCATTATGGCTTACCAATTTGGCCTCTTCTTGGAATGTTACCTTCTTTGTTCTTTGCACTAAGAACTAACCTCTATGAATGGATCACTGATGTGCTTAAACAGCAAAATGGTACATTCAGATTCAAAGGGCCTTGGTTTAGCAGCCTCAACTGCATTGTCACGGCCGATCCGCGAAACCTCGAGCATCTTCTCAAGACAAAGTTTTCTTTGTTCCCCAAAGGGAGATACTTCAGGGACACGGTGAGAGACCTACTTGGAGATGGAATCTTCAACGCCGACGACGAGACTTGGCAGAAGCAGAGGAAAACAGCAAGCATTGAGTTCCATTCAGCAAAATTCAGGAAGTTAACTACTGAATCCTTGTTTGAGCTTGTTCATTCGAGGCTCTTACCGGTCTTAGAATCCACCGTTAAGGAGAATGTTTCCATTGATCTACAAGACATCTTGTTGAGACTAACTTTTGACAATGTTTGTTTGATTGCGTTTGGGGTTGATCCCGGTTGCTTGCGGCCGGGGTTACCTAAAATACCATTTGCTAAGGCCTTTGAGGATGCAACAGAAGTAACAGTTCTTCGATTCGTTATCCCAACATGTGTATGGAAGGCAATGAGGTTCCTCAATTTGGGGATGGAGAAAAAGTTGAAGGAATCTATAAAAGGGGTTGATGAGTTTGCTGAGAATGTTATAAGAACAAGAAAGAAAGAACTGTCTTTGTTCTGTGATGAGAAGCAAAGATCAGATTTGTTAAGCATTTTCATGGGGCTGAAGGATGAGAATGGTGAAGCCTATTCGGATAAGTTCTTGAGGGATATATGTGTGAACTTCATTCTTGCAGGGAGAGACACTTCTTCTGTGGCTTTAAGCTGGTTTTTCTGGCTGCTTGATCAGAACCCTGAAGTGGAAGAGAAGATAGTAGAAGAGATATGCAGGGTAGTGAAACAGAAAGAAGATATTGATATGAAAATGAAGAAAGAAGAGTTTTTTGAGGGTTTGACATTTAGGCCTGAAGAGATTAAGAAGATGGATTATTTGCATGCTGCTCTTTCTGAAGCTCTCAGATTGTACCCTTCTGTTCCTGTTGATCACAAAGAGGTAGTTGAAGATGACACATTCCCAGATGGAACAGTGCTAAAGAAGGGGACAAAAGTGATCTATGCAATTTATTCAATGGGAAGAATGGAAGCCATTTGGGGAAAAGATTGCAGGGAATTCAAGCCAGAAAGATGGCTAAGAGATAATGCACGCTTCATGAGTGAATCTGCATACAAATTCACTGCCTTTAACGGCGGACCACGGTTGTGCTTAGGCAAAGACTTTGCTTACTATCAGATGAAATATGCCGCTGCTAGCATCATACTCCGCTACCGTGTTAAGGTGGTTGAGAACCACCCTGTGCTGCCTAAACTTGCATTGACTATGTACATGAAGCATGGAATCAAAGTTAACCTTCACAAGAGGGATGCTGAAGAAATTCACAAGTACTTGCGAGGTTGA 1779 0.412 MTTPPQMLLPLFFFKLTNNNKHMQFFHIPYHSNTKTMTKLSNLNLNLNLTTPQQDLPNGNNIFTLSLFLMQHIQMLEILLAITVFIVIHSLRQKKHYGLPIWPLLGMLPSLFFALRTNLYEWITDVLKQQNGTFRFKGPWFSSLNCIVTADPRNLEHLLKTKFSLFPKGRYFRDTVRDLLGDGIFNADDETWQKQRKTASIEFHSAKFRKLTTESLFELVHSRLLPVLESTVKENVSIDLQDILLRLTFDNVCLIAFGVDPGCLRPGLPKIPFAKAFEDATEVTVLRFVIPTCVWKAMRFLNLGMEKKLKESIKGVDEFAENVIRTRKKELSLFCDEKQRSDLLSIFMGLKDENGEAYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPEVEEKIVEEICRVVKQKEDIDMKMKKEEFFEGLTFRPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVEDDTFPDGTVLKKGTKVIYAIYSMGRMEAIWGKDCREFKPERWLRDNARFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIILRYRVKVVENHPVLPKLALTMYMKHGIKVNLHKRDAEEIHKYLRG* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1364 592 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 522 531 IPR017972 GO:0005506|GO:0016705
Amo13g1364 592 SUPERFAMILY Cytochrome P450 98 581 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1364 592 PRINTS E-class P450 group I signature 362 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1364 592 PRINTS E-class P450 group I signature 382 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1364 592 PRINTS E-class P450 group I signature 519 529 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1364 592 PRINTS E-class P450 group I signature 440 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1364 592 PRINTS E-class P450 group I signature 529 552 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1364 592 Gene3D Cytochrome P450 86 587 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1364 592 Pfam Cytochrome P450 101 567 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1364 592 PRINTS P450 superfamily signature 520 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1364 592 PRINTS P450 superfamily signature 529 540 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1364 592 PRINTS P450 superfamily signature 373 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1364 592 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1364 592 PANTHER BNAC02G41740D PROTEIN 62 583 - -
Amo13g1364 592 PANTHER CYTOCHROME P450 62 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1364 Amo-Chr13 18177684 18180768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1364 67 589 Cytochrome P450 AT5G23190 75.143 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1364 K15402 - gmx:100809503 893.264