Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1306 ATGGAGTTCCTTTCTCTCAACTTAGAGAACCAGTCTCCACTACCACCAAAGCCGAATCTTCTACGTCAGATCATCGTCGTGGCGTCTATCGCCGCCGGTGTTCAGTTTGGATGGGCTTTACAGCTATCCTTGCTGACACCCTACGCCCACCTCCTTGGTATCCCACAAGCTTCCGCAGCTTACATCTTATTTTGCGGACCAATAAGTGAGATGCTCGTGCAGCCCATAGTAGGCTACTATAGTGACCGCTGCACGTCGTGGTTTGGACGACAGCGGCCTTTCATTGCTCTCGGCACCTTAGCGGTCGCCATTGCAGTGCTTTTTATAGGCTACGCTACTGACATGGGACACATGTTTGGTGACTCGCTTGAGAAGAATGTCCGCTCGCGCGCCATAGTCATCTTCGTGGTCGGGTTCTAG 420 0.5238 MEFLSLNLENQSPLPPKPNLLRQIIVVASIAAGVQFGWALQLSLLTPYAHLLGIPQASAAYILFCGPISEMLVQPIVGYYSDRCTSWFGRQRPFIALGTLAVAIAVLFIGYATDMGHMFGDSLEKNVRSRAIVIFVVGF* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1306 139 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 9 139 - -
Amo13g1306 139 PANTHER SUGAR TRANSPORTER 9 139 - -
Amo13g1306 139 Gene3D MFS general substrate transporter like domains 21 138 IPR036259 -
Amo13g1306 139 Pfam MFS/sugar transport protein 31 114 - -
Amo13g1306 139 SUPERFAMILY MFS general substrate transporter 19 119 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1306 Amo-Chr13 17035828 17036247 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1306 8 139 Sucrose Transporter Gene Family AT1G71890 65.672 6.42e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1306 K15378 - aip:107632475 224.172