Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1297 ATGATTGATATGGGTTCTTCATCAGTAATAGACGGTGAAGTTACACTTCCAGGATTCAGGTTTCACCCTACTGAAGAAGAGCTCCTTGATTTCTATCTCAAGAACATGGTCGTTGGAAAGAAGCTCCGTTTCGATGTCATAGGCTTCCTCAACATCTATCACCATGATCCCTGGGACTTGCCAGGATTGGCTAAAGTGGGAGAGAGGGAATGGTATTTCTTTGTGCCTCGGGACAGAAAGCATGGCACCGGGGGAAGGCCAAACCGGACCACCGAGAAAGGGTTCTGGAAAGCAACCGGTTCCGACCGTAAGATTGTTACCTTGTCTGATCCGAAGCGCATAATTGGATTGAGGAAGACACTGGTTTTCTATGAGGGAAGAGCTCCACGTGGATCCAAGACCGATTGGGTCATGAATGAGTACCGTTTACCTGACAATTGCCCCTTGCCTAAGGACATAGTGTTATGCAAGATATATAGGAAGGCGACTTCATTGAAAGTGTTGGAGCAAAGAGCAGCAATAGAGGAAGAGATGAAGCAAATGGTAGGTTCCCCTGAATCCACACCTTCCTCCACAGACACCATGTCCTATGAAGAACAACAACAGAATCAGAATCAGAATCAGAATCTGCAATTGTTACCACCACAACATGTTGTTACTAAGAAAGAGGTTGAAGCTGAACTTGAAGAGGAAAAAATGGTACATGTTACATTGGCAACAACAAAGCAAGAAAACAAGGACACAACAAAGAACAATAAAAGTAGTTGTTGTGGTAACACAAACACTAACAGTAACACAAGTAGTCTTCAATTGCCATTTGGGAAGGATAAGATCCCAGAGCTTCAAATGCCTATGATGATCACTGATTGGACCCAAGACACATTTTGGGCTCAATTGAATAGTCCTTGGCTCCAAAACTATACCTACTCCAACATATTAAACTTCTAG 948 0.4346 MIDMGSSSVIDGEVTLPGFRFHPTEEELLDFYLKNMVVGKKLRFDVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDRKHGTGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGSKTDWVMNEYRLPDNCPLPKDIVLCKIYRKATSLKVLEQRAAIEEEMKQMVGSPESTPSSTDTMSYEEQQQNQNQNQNLQLLPPQHVVTKKEVEAELEEEKMVHVTLATTKQENKDTTKNNKSSCCGNTNTNSNTSSLQLPFGKDKIPELQMPMMITDWTQDTFWAQLNSPWLQNYTYSNILNF* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1297 315 MobiDBLite consensus disorder prediction 183 209 - -
Amo13g1297 315 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Amo13g1297 315 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 315 - -
Amo13g1297 315 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 13 315 - -
Amo13g1297 315 SUPERFAMILY NAC domain 9 161 IPR036093 GO:0003677|GO:0006355
Amo13g1297 315 MobiDBLite consensus disorder prediction 178 209 - -
Amo13g1297 315 MobiDBLite consensus disorder prediction 242 272 - -
Amo13g1297 315 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
Amo13g1297 315 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1297 Amo-Chr13 16897852 16900217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1297 13 308 NAC Transcription Factor Family AT2G17040 58.108 5.53e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo13g1297 NAM 1.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1297 - - adu:107477264 585.489