Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1266 ATGATGGAGATAGAAGCTGCAACAAGTGGAAGTAGCAATAGTAGTGGCTTTGATAGGGGAAGCTACTTAGCATGGGAAGATCTAAAAGTTTTTCTTCCAAATTTTGGAAAAGGACCAACTAAGAGGTTGCTTAATGGCCTCAATGGTTATGCTGAACCTGGAAGGATCATGGCTATTATGGGACCTTCTGGCTCTGGAAAATCCACACTCCTTGATTCACTTGCAGGTAGGCTCTCAAAAAATGTGGTCATGACAGGAAATGTTATTCTCAATGGGAAGAAGAAAAACCTAGGCTATGGCTTTGTTGCGTACGTAACACAAGAGGATGTGGTGCTGGGAACCCTAACAGTGAAAGAAACGATATCGTATTCGGCAAATCTAAGGCTTCCAACATCAATGTCGAAAGAAGAAATAGAGAACATCGTGGAAGAAACAATCATAGAGATGGGACTGCAAGACTGTGCTGACAGGTTAATCGGAAACTGGCACCTCAGAGGGATAAGCGGCGGGGAGAAGAAGAGGCTCAGCATTGCCCTTGAGATCCTCACAAAGCCAAGCTTGCTGTTTCTTGATGAACCTACCAGCGGCCTCGACAGCGCCTCCGCCTTCTTCGTCGTTCAGACTCTCCGCAATGTCGCTCGTGACGGCCGCACTGTCATCTCCTCCATTCACCAGCCTAGCAGCGAAGTCTTTGCTCTCTTTGATGACCTTTTCTTGCTCTCCGGCGGCGAAACCGTTTATTTTGGAGAAGCTAAAATGGCCGTTCAGTTTTTTGCTGAAGCCGGATTTCCTTGTCCACGTAAAAGGAATCCTTCTGATCACTTCCTAAGATGCATCAATTCTGACTTTGATGTTGTCACGGCTACACTCAAAGGATCTCAAAGAATTCACGATGTTCCAAATTCAGCAGATCCTTTCATGAATATGGCCACAGCACAAATTAAAGCAATGCTGGTTGATAGATATAGGCGTTCAACTTATGCAACAAGAGCAAAGGACAGGATTCAAGAACTATCTACCAATGAAGGGCTTGAAAATGAGAGACAAAAGGGAAGTCAAGCAACTTGGTGGAAGCAACTGAGGACATTGACAAAGAGATCATTTGTGAACATGTGTAGAGATGTTGGATACTACTGGTTGAGGATCATAATCTACATCATAGTTTCAATATGTGTTGGAACTATCTATTTTGATATTGGCTATAGCTATACCTCAATCCTAGCTCGTGGTGCTTGTGGTGCATTTATCTCAGGCTTCATGACATTCATGTCTATTGGAGGCTTCCCATCATTCATTGAAGAAATGAAGGTTTTCTATAGAGAAAGGCTTAATGGATACTATGGAGTTGCAGCATATATTCTAGCCAACTTTCTATCTTCTTTCCCTTTCTTGGTTGCAATTGCTCTTACAACAAGCACCATCACATACAACATGGTGAAATTCAGGCCAGGGATCATTCACTTTGTGTTCTTCACTCTCAACATCTATGGTTGCATCTCTGTCATAGAGAGTCTCATGATGGTTGTAGCTTCTCTTGTTCCAAATTTCCTAATGGGGATCATCACAGGAGCTGGAATCATTGGAATCATGATGATGACCTCTGGATTCTTCAGGTTGCTATCTGATCTTCCAAAGCCAGTTTGGCGCTACCCAATTTCATATATCAGTTATGGTGCATGGGCAATTCAGGGTGCATACAAGAATGACTTGCTTGGACTTGAGTTTGAACCTATGATACCAGGGGACCCAAAATTAACAGGAGAATATGTGATAACACACATGTTGGGAATTGAATTAAACCATTCAAAATGGTGGGACTTAGGAGCACTATTATTGATCCTCATAGTATATAGGCTTTTGTTCTTCACCATACTCAAGTTGAAGGAAAGAGCATCTCCATTGTTTAAAAACCTTTATGCAAAGAGAACCATTCAGCAACTTGAAAAGAGACCTTCATTCAGAAAAATGCCTTCTTTCCCTTCCATGAGGCATCAACCACTCCACTCTTTGTCTTCTCAAGAGGGTCTTAATTCTCCACTTCATTAG 2046 0.4238 MMEIEAATSGSSNSSGFDRGSYLAWEDLKVFLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNVILNGKKKNLGYGFVAYVTQEDVVLGTLTVKETISYSANLRLPTSMSKEEIENIVEETIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTKPSLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVQFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIHDVPNSADPFMNMATAQIKAMLVDRYRRSTYATRAKDRIQELSTNEGLENERQKGSQATWWKQLRTLTKRSFVNMCRDVGYYWLRIIIYIIVSICVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLVAIALTTSTITYNMVKFRPGIIHFVFFTLNIYGCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGAYKNDLLGLEFEPMIPGDPKLTGEYVITHMLGIELNHSKWWDLGALLLILIVYRLLFFTILKLKERASPLFKNLYAKRTIQQLEKRPSFRKMPSFPSMRHQPLHSLSSQEGLNSPLH* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1266 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 23 267 IPR003439 GO:0005524
Amo13g1266 681 ProSitePatterns ABC transporters family signature. 167 181 IPR017871 GO:0005524
Amo13g1266 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 20 676 - -
Amo13g1266 681 MobiDBLite consensus disorder prediction 654 681 - -
Amo13g1266 681 Pfam ABC-2 type transporter 359 568 IPR013525 GO:0016020|GO:0140359
Amo13g1266 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 20 676 - -
Amo13g1266 681 CDD ABCG_EPDR 20 249 - -
Amo13g1266 681 Pfam ABC transporter 44 195 IPR003439 GO:0005524
Amo13g1266 681 Pfam ABC-2 type transporter 224 280 IPR043926 GO:0140359
Amo13g1266 681 Gene3D - 23 261 IPR027417 -
Amo13g1266 681 MobiDBLite consensus disorder prediction 664 681 - -
Amo13g1266 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 256 IPR027417 -
Amo13g1266 681 SMART AAA_5 53 224 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1266 Amo-Chr13 16475624 16482663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1266 39 236 Calmodulin-binding Proteins AT2G36910 31.797 4.85e-13 70.9