Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1256 ATGACAGGAAATGTTATTCTCAATGGGAAGAAGAAAAACCTAGGCTATGGCTTTGTTGCGTACGTAACACAAGAGGATGTGGTGCTGGGAACCCTAACAGTGAAAGAAACGATATCGTATTCGGCAAATCTAAGGCTTCCAACATCAATGTCGAAAGAAGAAATAGAGAACATCGTGGAAGAAACAATCATAGAGATGGGACTGCAAGACTGTGCTGACAGGTTAATCGGAAACTGGCACCTCAGAGGGATAAGCGGCGGGGAGAAGAAGAGGCTCAGCATTGCCCTTGAGATCCTCACAAAGCCAAGCTTGCTGTTTCTTGATGAACCTACCAGCGGCCTCGACAGCGCCTCCGCCTTCTTCGTCGTTCAGACTCTCCGCAATGTCGCTCGTGACGGCCGCACTGTCATCTCCTCCATTCACCAGCCTAGCAGCGAAGTCTTTGCTCTCTTTGATGACCTTTTCTTGCTCTCCGGCGGCGAAACCGTTTATTTTGGAGAAGCTAAAATGGCCGTTCAGTTTTTTGCTGAAGCCGGATTTCCTTGTCCACGTAAAAGGAATCCTTCTGATCACTTCCTAAGATGCATCAATTCTGACTTTGATGTTGTCACGGCTACACTCAAAGGATCTCAAAGAATTCACGATGTTCCAAATTCAGCAGATCCTTTCATGAATATGGCCACAGCACAAATTAAAGCAATGCTGGTTGATAGATATAGGCGTTCAACTTATGCAACAAGAGCAAAGGACAGGATTCAAGAACTATCTACCAATGAAGGGCTTGAAAATGAGAGACAAAAGGGAAGTCAAGCAACTTGGTGGAAGCAACTGAGGACATTGACAAAGAGATCATTTGTGAACATGTGTAGAGATGTTGGATACTACTGGTTGAGGATCATAATCTACATCATAGTTTCAATATGTGTTGGAACTATCTATTTTGATATTGGCTATAGCTATACCTCAATCCTAGCTCGTGGTGCTTGTGGTGCATTTATCTCAGGCTTCATGACATTCATGTCTATTGGAGGCTTCCCATCATTCATTGAAGAAATGAAGGTTTTCTATAGAGAAAGGCTTAATGGATACTATGGAGTTGCAGCATATATTCTAGCCAACTTTCTATCTTCTTTCCCTTTCTTGGTTGCAATTGCTCTTACAACAAGCACCATCACATACAACATGGTGAAATTCAGGCCAGGGATCATTCACTTTGTGTTCTTCACTCTCAACATCTATGGTTGCATCTCTGTCATAGAGAGTCTCATGATGGTTGTAGCTTCTCTTGTTCCAAATTTCCTAATGGGGATCATCACAGGAGCTGGAATCATTGGAATCATGATGATGACCTCTGGATTCTTCAGGTTGCTATCTGATCTTCCAAAGCCAGTTTGGCGCTACCCAATTTCATATATCAGTTATGGTGCATGGGCAATTCAGGGTGCATACAAGAATGACCTGCTTGGACTTGAGTTTGAACCTATGATACCAGGGGACCCAAAATTAACAGGAGAATATGTGATAACACACATGTTGGGAATTGAATTAAACCATTCAAAATGGTGGGACTTAGGAGCACTATTATTGATCCTCATAGTATATAGGCTTTTGTTCTTCACCATACTCAAGTTGAAGGAAAGAGCATCTCCATTGTTTAAAAACCTTTATGCAAAGAGAACCATTCAGCAACTTGAAAAGAGACCTTCATTCAGAAAAATGCCTTCTTTCCCTTCCATGAGGCATCAACCACTCCACTCTTTGTCTTCTCAAGAGGGTCTTAATTCTCCACTTCATTAG 1797 0.424 MTGNVILNGKKKNLGYGFVAYVTQEDVVLGTLTVKETISYSANLRLPTSMSKEEIENIVEETIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTKPSLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVQFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIHDVPNSADPFMNMATAQIKAMLVDRYRRSTYATRAKDRIQELSTNEGLENERQKGSQATWWKQLRTLTKRSFVNMCRDVGYYWLRIIIYIIVSICVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLVAIALTTSTITYNMVKFRPGIIHFVFFTLNIYGCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGAYKNDLLGLEFEPMIPGDPKLTGEYVITHMLGIELNHSKWWDLGALLLILIVYRLLFFTILKLKERASPLFKNLYAKRTIQQLEKRPSFRKMPSFPSMRHQPLHSLSSQEGLNSPLH* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1256 598 MobiDBLite consensus disorder prediction 571 598 - -
Amo13g1256 598 Pfam ABC-2 type transporter 141 197 IPR043926 GO:0140359
Amo13g1256 598 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 593 - -
Amo13g1256 598 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 1 593 - -
Amo13g1256 598 Pfam ABC-2 type transporter 276 485 IPR013525 GO:0016020|GO:0140359
Amo13g1256 598 Gene3D - 1 178 IPR027417 -
Amo13g1256 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 173 IPR027417 -
Amo13g1256 598 MobiDBLite consensus disorder prediction 581 598 - -
Amo13g1256 598 Pfam ABC transporter 19 112 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1256 Amo-Chr13 16379005 16383715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1256 2 153 Calmodulin-binding Proteins AT2G36910 31.579 1.39e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1256 K05681 - gmx:100777598 1068.14